RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 FARP2O94887 1054 aaPredicted RBP17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 PRKCBP05771 671 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 KRT19P08727 400 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 ESRRAP11474 423 aaPredicted RBP17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 VHLP40337 213 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 CPA2P48052 419 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 KRT72Q14CN4 511 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 CCDC6Q16204 474 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 TRNP1Q6NT89 227 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 TMEM192Q8IY95 271 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 VPS52Q8N1B4 723 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 LRRC71Q8N4P6 559 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 MCUR1Q96AQ8 359 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 TUBB6Q9BUF5 446 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 PLAC1Q9HBJ0 212 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 SPDYE5A6NIY4 337 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 CAPN9O14815 690 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 RARBP10826 455 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 DPEP1P16444 411 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 STAT5BP51692 787 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 EFNA5P52803 228 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 PRAMEF18Q5VWM3 479 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 SAMD7Q7Z3H4 446 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 SLC4A11Q8NBS3 891 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 RNF149Q8NC42 400 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 ARMC2Q8NEN0 867 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 FBXO27Q8NI29 283 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 DTX3LQ8TDB6 740 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 UCMAQ8WVF2 138 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 ASCC2Q9H1I8 757 aaPredicted RBP17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 ZNF395Q9H8N7 513 aaPredicted RBP17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 RSAD1Q9HA92 442 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 SIX4Q9UIU6 781 aa17.26■□□□□ 0.35
PCDHGA11-202ENST00000518882 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 MED7O43513 233 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 RNF8O76064 485 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 PSMG1O95456 288 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 IL1BP01584 269 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 CDH6P55285 790 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 YWHAZP63104 245 aaKnown RBP17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 MRPS35P82673 323 aaKnown RBP17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 MRPS5P82675 430 aaKnown RBP17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 FAXCQ5TGI0 409 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 C1orf228Q6PIY5 440 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 PPM1NQ8N819 430 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 SCG3Q8WXD2 468 aaKnown RBP17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 FAF2Q96CS3 445 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 SMYD3Q9H7B4 428 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 USP29Q9HBJ7 922 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 RAB6BQ9NRW1 208 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 NRBP2Q9NSY0 501 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 HACL1Q9UJ83 578 aa17.25■□□□□ 0.35
PCDHGA11-202ENST00000518882 PIK3R2O00459 728 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 COPEO14579 308 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 B4GALT5O43286 388 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 UGT1A9O60656 530 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 MICAL2O94851 1124 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 ENDOD1O94919 500 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 STIP1P31948 543 aaKnown RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 KLC1Q07866 573 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 TTC39BQ5VTQ0 682 aaPredicted RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 CCDC62Q6P9F0 684 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 CATSPERGQ6ZRH7 1159 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 SLC26A11Q86WA9 606 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 TREML1Q86YW5 311 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 CTAGE3PQ8IX95 158 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 ZNF483Q8TF39 744 aaPredicted RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 LRRN4Q8WUT4 740 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 MCRS1Q96EZ8 462 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 PIWIL1Q96J94 861 aaKnown RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 BCO2Q9BYV7 579 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 ELOVL4Q9GZR5 314 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 UGT1A7Q9HAW7 530 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 UGT1A10Q9HAW8 530 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 UGT1A8Q9HAW9 530 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 SMYD2Q9NRG4 433 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 WDR35Q9P2L0 1181 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 TRIP11Q15643 1979 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 SPDYE16A6NNV3 312 aaPredicted RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 ENO4A6NNW6 628 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 KLF11O14901 512 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 CHADO15335 359 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 MAP3K6O95382 1288 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 TNNC2P02585 160 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 GJB1P08034 283 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 TCF7P36402 384 aaPredicted RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 C15orf59Q2T9L4 293 aaPredicted RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 FAM102AQ5T9C2 384 aaPredicted RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 EEF1DP3Q658K8 133 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 LRRC74BQ6ZQY2 392 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 RFX8Q6ZV50 586 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 ANKRD36BP1Q96IX9 119 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 TRIM56Q9BRZ2 755 aaKnown RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 POPDC2Q9HBU9 364 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 PNPLA8Q9NP80 782 aa17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.24■□□□□ 0.35
PCDHGA11-202ENST00000518882 H7C0C1 242 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms