RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 MCOLN1Q9GZU1 580 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 EPC1Q9H2F5 836 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 RRN3Q9NYV6 651 aa15.77■□□□□ 0.12
TRAPPC9-205ENST00000518839 FAM187AA6NFU0 413 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 HHLA1C9JL84 531 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 TRIM66O15016 1216 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 TJP3O95049 919 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 TNFRSF8P28908 595 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 MAGEA11P43364 429 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 FNTAP49354 379 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 DAOAP59103 153 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 WDR5P61964 334 aaKnown RBP15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 SLC39A12Q504Y0 691 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 TRNP1Q6NT89 227 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 AADACL2Q6P093 401 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 FBXO38Q6PIJ6 1188 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 SPOCD1Q6ZMY3 1216 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 MTERF4Q7Z6M4 381 aaKnown RBP15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 UBE2Q1Q7Z7E8 422 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 CEP57Q86XR8 500 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 IFT20Q8IY31 132 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 ARFGAP1Q8N6T3 406 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 CLEC4CQ8WTT0 213 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 FAM172AQ8WUF8 416 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 HNRNPLLQ8WVV9 542 aaKnown RBP15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 CENPIQ92674 756 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 FAM149B1Q96BN6 582 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 ZNF689Q96CS4 500 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 CFAP57Q96MR6 1250 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 SLC2A13Q96QE2 648 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 TMEM209Q96SK2 561 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 PNKPQ96T60 521 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 TTPALQ9BTX7 342 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 GPR62Q9BZJ7 368 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 ULBP1Q9BZM6 244 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 DDX47Q9H0S4 455 aaKnown RBP15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 CWH43Q9H720 699 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 ZWILCHQ9H900 591 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 POPDC2Q9HBU9 364 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 NGRNQ9NPE2 291 aaKnown RBP15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 TMLHEQ9NVH6 421 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 TMEM51Q9NW97 253 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 FEZ2Q9UHY8 353 aaPredicted RBP15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 RASAL2Q9UJF2 1139 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 PCDHB5Q9Y5E4 795 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 COL4A6Q14031 1691 aa15.76■□□□□ 0.11
TRAPPC9-205ENST00000518839 ALPK3Q96L96 1907 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 LRRD1A4D1F6 860 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 RAD51CO43502 376 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 HEXIM1O94992 359 aaKnown RBP15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 ZBED1O96006 694 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 RALAP11233 206 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 TCF4P15884 667 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 LAG3P18627 525 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 ITGB8P26012 769 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 ATP11AP98196 1134 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 PDK2Q15119 407 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 TAF5Q15542 800 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 CDO1Q16878 200 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 C15orf59Q2T9L4 293 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 SLC25A52Q3SY17 297 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 TFDP3Q5H9I0 405 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 SPOUT1Q5T280 376 aaKnown RBP15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 TMCO3Q6UWJ1 677 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 BEND5Q7L4P6 421 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 VSIG1Q86XK7 387 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 MAP7D3Q8IWC1 876 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 PRELID2Q8N945 189 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 CMASQ8NFW8 434 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 SPPL2BQ8TCT7 592 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 MAGOHBQ96A72 148 aaKnown RBP15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 RNF25Q96BH1 459 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 C8orf48Q96LL4 319 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 ZNF558Q96NG5 402 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 KCNK16Q96T55 309 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 C11orf84Q9BUA3 381 aaPredicted RBP15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 RAB17Q9H0T7 212 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 LRRC19Q9H756 370 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 STK39Q9UEW8 545 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 PCYOX1Q9UHG3 505 aa15.75■□□□□ 0.11
TRAPPC9-205ENST00000518839 CENPFP49454 3210 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 MYO16Q9Y6X6 1858 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 CAPN9O14815 690 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 MDM4O15151 490 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 RARAP10276 462 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 KDELR1P24390 212 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 IL1R2P27930 398 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 GRIK1P39086 918 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 CLCN6P51797 869 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 CACNA2D1P54289 1103 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 VSNL1P62760 191 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 KLF1Q13351 362 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 SIX1Q15475 284 aaPredicted RBP15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 TAZQ16635 292 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 USP41Q3LFD5 358 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 ATP13A4Q4VNC1 1196 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 PM20D1Q6GTS8 502 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 MFSD7Q6UXD7 560 aa15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 ADAT2Q7Z6V5 191 aaKnown RBP15.74■□□□□ 0.11
TRAPPC9-205ENST00000518839 DEFB106AQ8N104 65 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms