RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 TMEM31Q5JXX7 168 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 UBA3Q8TBC4 463 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 SLC22A12Q96S37 553 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 CYP2S1Q96SQ9 504 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 CHORDC1Q9UHD1 332 aaPredicted RBP23.19■■□□□ 1.3
VEGFA-217ENST00000518538 FBXL21Q9UKT6 434 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 USP3Q9Y6I4 520 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 ANAPC1Q9H1A4 1944 aa23.19■■□□□ 1.3
VEGFA-217ENST00000518538 M0QYV0 167 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 TULP2O00295 520 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 MED7O43513 233 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 OLFM2O95897 454 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 GNA15P30679 374 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 TUBP50607 506 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 UBXN1Q04323 297 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 FCHO2Q0JRZ9 810 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 RAPGEF1Q13905 1077 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 CCDC186Q7Z3E2 898 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 YAF2Q8IY57 180 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 BPIFB1Q8TDL5 484 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 LRRC3BQ96PB8 259 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 NAA15Q9BXJ9 866 aaKnown RBP23.18■■□□□ 1.3
VEGFA-217ENST00000518538 BRD9Q9H8M2 597 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 TLR8Q9NR97 1041 aaKnown RBP23.18■■□□□ 1.3
VEGFA-217ENST00000518538 CCL26Q9Y258 94 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 SIK3Q9Y2K2 1263 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 DAAM1Q9Y4D1 1078 aa23.18■■□□□ 1.3
VEGFA-217ENST00000518538 PRR33A8MZF0 331 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 FOXN3O00409 490 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-217ENST00000518538 CYP26A1O43174 497 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 GDI1P31150 447 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 KLK7P49862 253 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 DRAP1Q14919 205 aaPredicted RBP23.17■■□□□ 1.3
VEGFA-217ENST00000518538 MEA1Q16626 185 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 LUZP1Q86V48 1076 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 SLC35F5Q8WV83 523 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 ZNF606Q8WXB4 792 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 KCTD13Q8WZ19 329 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 SECISBP2LQ93073 1101 aaKnown RBP23.17■■□□□ 1.3
VEGFA-217ENST00000518538 ERGIC2Q96RQ1 377 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 GANQ9H2C0 597 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 ARHGAP26Q9UNA1 814 aa23.17■■□□□ 1.3
VEGFA-217ENST00000518538 TECTAO75443 2155 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 ZNF263O14978 683 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 THAP12O43422 761 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 TCF3P15923 654 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 TKTL1P51854 596 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 TPM4P67936 248 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 SLC7A9P82251 487 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 SYCP1Q15431 976 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 HECTD3Q5T447 861 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 BMP8AQ7Z5Y6 402 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 FAM71AQ8IYT1 594 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 DNASE1L2Q92874 299 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 IRF7Q92985 503 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 RNF38Q9H0F5 515 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 LRRC4Q9HBW1 653 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 ACP6Q9NPH0 428 aa23.16■■□□□ 1.3
VEGFA-217ENST00000518538 FAM207AQ9NSI2 230 aaPredicted RBP23.16■■□□□ 1.3
VEGFA-217ENST00000518538 CHADO15335 359 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 COCHO43405 550 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 PGFP49763 221 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 PTK2Q05397 1052 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 USP4Q13107 963 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 ARHGAP29Q52LW3 1261 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 SIX5Q8N196 739 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 STK33Q9BYT3 514 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 TRPV5Q9NQA5 729 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 THG1LQ9NWX6 298 aaKnown RBP23.15■■□□□ 1.3
VEGFA-217ENST00000518538 CA14Q9ULX7 337 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 MYO16Q9Y6X6 1858 aa23.15■■□□□ 1.3
VEGFA-217ENST00000518538 A0A1W2PQH9 124 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 PNMA6AP0CW24 399 aaPredicted RBP23.14■■□□□ 1.29
VEGFA-217ENST00000518538 CLCN1P35523 988 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 PSEN1P49768 467 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 BPIFB4P59827 614 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 PLCB2Q00722 1185 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 ZNF77Q15935 545 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 FILIP1LQ4L180 1135 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 PM20D1Q6GTS8 502 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 HFE2Q6ZVN8 426 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 SH3RF2Q8TEC5 729 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 PBXIP1Q96AQ6 731 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 HSFY1Q96LI6 401 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 PCMTD1Q96MG8 357 aaPredicted RBP23.14■■□□□ 1.29
VEGFA-217ENST00000518538 CCSER2Q9H7U1 834 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 NMUR1Q9HB89 426 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 RTN4Q9NQC3 1192 aaKnown RBP23.14■■□□□ 1.29
VEGFA-217ENST00000518538 CYLDQ9NQC7 956 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 ARHGEF3Q9NR81 526 aa23.14■■□□□ 1.29
VEGFA-217ENST00000518538 KRBA1A5PL33 1030 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 F8VZ95 297 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 ARNTLO00327 626 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 EPHB6O15197 1021 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 TLR5O60602 858 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 ZBED1O96006 694 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 GPD2P43304 727 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 POLR2FP61218 127 aaKnown RBP23.13■■□□□ 1.29
VEGFA-217ENST00000518538 ADIGQ0VDE8 80 aa23.13■■□□□ 1.29
VEGFA-217ENST00000518538 PMF1Q6P1K2 205 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms