RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 SCML2Q9UQR0 700 aa11.84□□□□□ -0.51
SCARNA16.1-201ENST00000516133 NUP210Q8TEM1 1887 aaPredicted RBP11.84□□□□□ -0.51
SCARNA16.1-201ENST00000516133 HHLA1C9JL84 531 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SLC9A3R1O14745 358 aaPredicted RBP11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PAEPP09466 180 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ACO1P21399 889 aaKnown RBP11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 IFNAR2P48551 515 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 KIF11P52732 1056 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GCNT1Q02742 428 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 NR1H3Q13133 447 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 FZD5Q13467 585 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ANGPT1Q15389 498 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ZNF77Q15935 545 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SGO2Q562F6 1265 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 FAM114A1Q8IWE2 563 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ZNF687Q8N1G0 1237 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TTC16Q8NEE8 873 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ATP2A3Q93084 1043 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MED15Q96RN5 788 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 IER2Q9BTL4 223 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 EBF3Q9H4W6 596 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 LMAN1LQ9HAT1 526 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SPATA6Q9NWH7 488 aaPredicted RBP11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CPQQ9Y646 472 aa11.83□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ANAPC1Q9H1A4 1944 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MYH10P35580 1976 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 LEFTY2O00292 366 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 COCHO43405 550 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 LAMTOR5O43504 91 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MBL2P11226 248 aaPredicted RBP11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CHRNB1P11230 501 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 VDRP11473 427 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CD19P15391 556 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SOX9P48436 509 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PSEN1P49768 467 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 USP4Q13107 963 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 LRRC32Q14392 662 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 DPCR1Q3MIW9 517 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 DGKKQ5KSL6 1271 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TRIM68Q6AZZ1 485 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TMEM270Q6UE05 265 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 IRF2BP1Q8IU81 584 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SYNPOQ8N3V7 929 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CPA6Q8N4T0 437 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TTC8Q8TAM2 541 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 RIN3Q8TB24 985 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CNOT6LQ96LI5 555 aaKnown RBP11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 FAM81BQ96LP2 452 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 NACA2Q9H009 215 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 THAP9Q9H5L6 903 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ECT2Q9H8V3 914 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 HPS4Q9NQG7 708 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SMPD4Q9NXE4 827 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GMIPQ9P107 970 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 HESX1Q9UBX0 185 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PCDHB4Q9Y5E5 795 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 USP3Q9Y6I4 520 aa11.82□□□□□ -0.52
SCARNA16.1-201ENST00000516133 OBSL1O75147 1896 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 E2F8A0AVK6 867 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GTPBP10A4D1E9 387 aaKnown RBP11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 OTOL1A6NHN0 477 aaPredicted RBP11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TLR5O60602 858 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 NFATC1O95644 943 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MBD3O95983 291 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ARSAP15289 507 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ATP5C1P36542 298 aaKnown RBP11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 MTIF2P46199 727 aaKnown RBP11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ZXDBP98169 803 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GRSF1Q12849 480 aaKnown RBP eCLIP11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 STILQ15468 1287 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 EML3Q32P44 896 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 SMYD5Q6GMV2 418 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TXNDC11Q6PKC3 985 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GBP6Q6ZN66 633 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 RRAGAQ7L523 313 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ENOSF1Q7L5Y1 443 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CCDC186Q7Z3E2 898 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TADA2BQ86TJ2 420 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 PIGZQ86VD9 579 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ADGRG2Q8IZP9 1017 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ARHGAP18Q8N392 663 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 ZNF276Q8N554 614 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 UBR7Q8N806 425 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 GPT2Q8TD30 523 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CDK5RAP1Q96SZ6 601 aaKnown RBP11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 INTS2Q9H0H0 1204 aaKnown RBP11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 LINC00597Q9H2U6 94 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CHRDQ9H2X0 955 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CCSER2Q9H7U1 834 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CYLDQ9NQC7 956 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CLIC5Q9NZA1 410 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 CFAP97Q9P2B7 532 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TBC1D14Q9P2M4 693 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 FBXO4Q9UKT5 387 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 WNT6Q9Y6F9 365 aa11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 EP300Q09472 2414 aaPredicted RBP11.81□□□□□ -0.52
SCARNA16.1-201ENST00000516133 TICRRQ7Z2Z1 1910 aa11.8□□□□□ -0.52
SCARNA16.1-201ENST00000516133 O00370 1275 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms