RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 SPATA31D3P0C874 917 aa8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 ITGALP20701 1170 aa8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 TIAL1Q01085 375 aaKnown RBP eCLIP8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 CSHL1Q14406 222 aa8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 NAA35Q5VZE5 725 aa8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 ATG16L1Q676U5 607 aa8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 SFRP4Q6FHJ7 346 aaPredicted RBP8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 ITPRIPL1Q6GPH6 555 aa8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 ACAD10Q6JQN1 1059 aa8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 SPATA31D4Q6ZUB0 917 aa8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 ZMIZ2Q8NF64 920 aa8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 NDRG4Q9ULP0 352 aaKnown RBP8.66□□□□□ -1.02
LDHBP3-201ENST00000514909 SAC3D1A6NKF1 404 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 LARGE1O95461 756 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 HNRNPA1P09651 372 aaKnown RBP eCLIP8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 KCNA2P16389 499 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 HK1P19367 917 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 MAN2A2P49641 1150 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 CASP6P55212 293 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 FZD5Q13467 585 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 CCNIQ14094 377 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 GRM7Q14831 915 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 CLCA4Q14CN2 919 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 RPS6KA2Q15349 733 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 PTCHD3Q3KNS1 767 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 CTXN3Q4LDR2 81 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 ZNF385BQ569K4 471 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 DGAT2L7PQ6IED9 249 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 TMEM108Q6UXF1 575 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 SLC30A10Q6XR72 485 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 TRABD2AQ86V40 505 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 SYT12Q8IV01 421 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 LINC01356Q8N9X3 169 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 UCMAQ8WVF2 138 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 ZUFSPQ96AP4 578 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 PLA2G12BQ9BX93 195 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 BRD8Q9H0E9 1235 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 CHODLQ9H9P2 273 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 ARHGAP26Q9UNA1 814 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 JAG2Q9Y219 1238 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 DNAJC16Q9Y2G8 782 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 TTLL3Q9Y4R7 772 aa8.65□□□□□ -1.02
LDHBP3-201ENST00000514909 PGPEP1LA6NFU8 196 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 FAM90A20PA6NIJ5 464 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 CBFA2T3O75081 653 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 ZBED4O75132 1171 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 RPP40O75818 363 aaKnown RBP8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 SUN1O94901 812 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 RTN3O95197 1032 aaPredicted RBP8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 HLA-DOAP06340 250 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 RBL1P28749 1068 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 ANXA11P50995 505 aaKnown RBP8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 PGDP52209 483 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 FHL3Q13643 280 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 E2F2Q14209 437 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 NFIXQ14938 502 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 BAK1Q16611 211 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 NRN1LQ496H8 165 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 SLC45A4Q5BKX6 768 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 FAM102AQ5T9C2 384 aaPredicted RBP8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 SLC15A3Q8IY34 581 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 NSUN7Q8NE18 718 aaKnown RBP8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 NGDNQ8NEJ9 315 aaKnown RBP8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 TDRD7Q8NHU6 1098 aaKnown RBP8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 SUN3Q8TAQ9 357 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 ZNF483Q8TF39 744 aaPredicted RBP8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 HIST1H2AAQ96QV6 131 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 LMF1Q96S06 567 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 GPR20Q99678 358 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 PAAF1Q9BRP4 392 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 SMOC2Q9H3U7 446 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 NSMCE4AQ9NXX6 385 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 HSFX1Q9UBD0 423 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 USP22Q9UPT9 525 aa8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 MRPS17Q9Y2R5 130 aaKnown RBP8.64□□□□□ -1.03
LDHBP3-201ENST00000514909 A0A1W2PPH5 198 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 GXYLT2A0PJZ3 443 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 USO1O60763 962 aaKnown RBP8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 GFPT2O94808 682 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 CSF1RP07333 972 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 PRKAR1BP31321 381 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 ATXN1P54253 815 aaKnown RBP8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 NUCB1Q02818 461 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 ELAVL1Q15717 326 aaKnown RBP8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 TBRG1Q3YBR2 411 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 GALNTL6Q49A17 601 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 SLC9C2Q5TAH2 1124 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 NAIF1Q69YI7 327 aaPredicted RBP8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 RASGRP2Q7LDG7 609 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 LRRC71Q8N4P6 559 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 RSRC1Q96IZ7 334 aaKnown RBP8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 NEU1Q99519 415 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 BARD1Q99728 777 aaKnown RBP8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 PRDM13Q9H4Q3 707 aa8.63□□□□□ -1.03
LDHBP3-201ENST00000514909 TDRD9Q8NDG6 1382 aaKnown RBP8.62□□□□□ -1.03
LDHBP3-201ENST00000514909 ADM5C9JUS6 153 aa8.62□□□□□ -1.03
LDHBP3-201ENST00000514909 KRT38O76015 456 aa8.62□□□□□ -1.03
LDHBP3-201ENST00000514909 HGFP14210 728 aa8.62□□□□□ -1.03
LDHBP3-201ENST00000514909 EPHA3P29320 983 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms