RNA–Protein interactions for RNA: ENST00000514439.1

CPNE4-211, Transcript of copine 4, humanhuman

TSL 1 (best)

Gene CPNE4, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-211ENST00000514439 PPM1EQ8WY54 764 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 B3GNT5Q9BYG0 378 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 MLXIPLQ9NP71 852 aa8.57□□□□□ -1.04
CPNE4-211ENST00000514439 TCRBV7S3A2A0A539 114 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 RASA4BC9J798 803 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 PIRO00625 290 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 RASA4O43374 803 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 TMEM63AO94886 807 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 CD4P01730 458 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 VIMP08670 466 aaKnown RBP8.56□□□□□ -1.04
CPNE4-211ENST00000514439 PDGFRBP09619 1106 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 FGFR1P11362 822 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 ADORA2BP29275 332 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 CPT1AP50416 773 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 ARL4CP56559 192 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 ROR1Q01973 937 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 SOX4Q06945 474 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-211ENST00000514439 ADCY1Q08828 1119 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 TFDP2Q14188 446 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 ZC3H12AQ5D1E8 599 aaKnown RBP8.56□□□□□ -1.04
CPNE4-211ENST00000514439 FAM47CQ5HY64 1035 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 FNBP1LQ5T0N5 605 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 UBXN11Q5T124 520 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 CST9Q5W186 159 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 CCDC121Q6ZUS5 278 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 ZC3H18Q86VM9 953 aaKnown RBP8.56□□□□□ -1.04
CPNE4-211ENST00000514439 TDRPQ86YL5 185 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 ANKMY2Q8IV38 441 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 MICALL1Q8N3F8 863 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.56□□□□□ -1.04
CPNE4-211ENST00000514439 STK32AQ8WU08 396 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 MAML1Q92585 1016 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 P3H4Q92791 437 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 ZNF560Q96MR9 790 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 RNF157Q96PX1 679 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 WDR83Q9BRX9 315 aaKnown RBP8.56□□□□□ -1.04
CPNE4-211ENST00000514439 SNRNP25Q9BV90 132 aaKnown RBP8.56□□□□□ -1.04
CPNE4-211ENST00000514439 PHACTR1Q9C0D0 580 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 GOLGA2P5Q9HBQ8 144 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 ACTL7BQ9Y614 415 aa8.56□□□□□ -1.04
CPNE4-211ENST00000514439 C17orf102A2RUQ5 167 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 KPNA7A9QM74 516 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 POC1B-GALNT4F8VUJ3 575 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 CPP00450 1065 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 TFE3P19532 575 aaPredicted RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 CYP2B6P20813 491 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 IL4RP24394 825 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 LMO2P25791 158 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 RDXP35241 583 aaKnown RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 BCAT1P54687 386 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 HDAC4P56524 1084 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 HUNKP57058 714 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 GPX6P59796 221 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 BASP1P80723 227 aaKnown RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 BST2Q10589 180 aaKnown RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 PDK2Q15119 407 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 TAF1CQ15572 869 aaPredicted RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 CA9Q16790 459 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 BOLA3Q53S33 107 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 XKR4Q5GH76 650 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 ZNF618Q5T7W0 954 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 DARS2Q6PI48 645 aaKnown RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 C1orf228Q6PIY5 440 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 TAX1BP1Q86VP1 789 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 ZDHHC17Q8IUH5 632 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 MAP7D3Q8IWC1 876 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 CCDC197Q8NCU1 140 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 GDAP1Q8TB36 358 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 CLEC4CQ8WTT0 213 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 TEKT4Q8WW24 435 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 USP6NLQ92738 828 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 TBCBQ99426 244 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 NSRP1Q9H0G5 558 aaKnown RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 AP5M1Q9H0R1 490 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 RRAGCQ9HB90 399 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 PCDH18Q9HCL0 1135 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 UBN1Q9NPG3 1134 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 IPPQ9Y573 584 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 CLUHO75153 1309 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 DOCK3Q8IZD9 2030 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 E7ESA3 106 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 MDM4O15151 490 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 XPOTO43592 962 aaKnown RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 KCNE1P15382 129 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 STIP1P31948 543 aaKnown RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 GNL1P36915 607 aaPredicted RBP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 SNX16P57768 344 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 SF3A3Q12874 501 aaKnown RBP eCLIP8.55□□□□□ -1.04
CPNE4-211ENST00000514439 NR1H3Q13133 447 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 MTM1Q13496 603 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 PIGWQ7Z7B1 504 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 TRABD2AQ86V40 505 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 CRYBG2Q8N1P7 616 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 PQLC3Q8N755 202 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 PLD5Q8N7P1 536 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 ANKRD52Q8NB46 1076 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 ATP11CQ8NB49 1132 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 ARRDC4Q8NCT1 418 aa8.55□□□□□ -1.04
CPNE4-211ENST00000514439 SMG8Q8ND04 991 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms