RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 TM4SF5O14894 197 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 COCHO43405 550 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 CLSTN1O94985 981 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 CHRM1P11229 460 aaPredicted RBP12.96□□□□□ -0.33
SNHG4-208ENST00000514110 PDIA4P13667 645 aaKnown RBP12.96□□□□□ -0.33
SNHG4-208ENST00000514110 HNRNPLP14866 589 aaKnown RBP eCLIP12.96□□□□□ -0.33
SNHG4-208ENST00000514110 DGKEP52429 567 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 AP3M2P53677 418 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 SLC5A3P53794 718 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 ORC1Q13415 861 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 STPG1Q5TH74 334 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 IL31Q6EBC2 164 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 TCEAL6Q6IPX3 200 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 ACOT1Q86TX2 421 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 FUKQ8N0W3 1084 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 PDZD8Q8NEN9 1154 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 OVCA2Q8WZ82 227 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 TCEAL3Q969E4 200 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 TNIP3Q96KP6 325 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 TPSD1Q9BZJ3 242 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 KRT82Q9NSB4 513 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 IL37Q9NZH6 218 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 CFAP45Q9UL16 551 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 MMP17Q9ULZ9 603 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 SPTBN2O15020 2390 aa12.96□□□□□ -0.33
SNHG4-208ENST00000514110 SDK1Q7Z5N4 2213 aa12.96□□□□□ -0.34
SNHG4-208ENST00000514110 ATP8B3O60423 1300 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 A0A1B0GVL5 298 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 BEST1O76090 585 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 CCDC130P13994 396 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 PFKFB1P16118 471 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 PGFP49763 221 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 ELF2Q15723 593 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 C1orf220Q5T0J3 134 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 HECTD3Q5T447 861 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 EMC10Q5UCC4 262 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 SNX30Q5VWJ9 437 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 ANO7Q6IWH7 933 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 TMEM92Q6UXU6 159 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 RASSF3Q86WH2 238 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 DDX42Q86XP3 938 aaKnown RBP eCLIP12.95□□□□□ -0.34
SNHG4-208ENST00000514110 SLC9A9Q8IVB4 645 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 ALLCQ8N6M5 410 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 ZMIZ2Q8NF64 920 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 CCDC26Q8TAB7 109 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 TMEM174Q8WUU8 243 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 WBP2Q969T9 261 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 SMARCD1Q96GM5 515 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 CHAMP1Q96JM3 812 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 PNKPQ96T60 521 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 SMOQ99835 787 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 CCSER2Q9H7U1 834 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 DMAP1Q9NPF5 467 aaPredicted RBP12.95□□□□□ -0.34
SNHG4-208ENST00000514110 VPS45Q9NRW7 570 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 GMIPQ9P107 970 aa12.95□□□□□ -0.34
SNHG4-208ENST00000514110 E2F8A0AVK6 867 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 FAM92AA1XBS5 289 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 BCLAF3A2AJT9 711 aaKnown RBP12.94□□□□□ -0.34
SNHG4-208ENST00000514110 PDXKO00764 312 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 AP1G2O75843 785 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 RHOBTB1O94844 696 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 KAT7O95251 611 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
SNHG4-208ENST00000514110 ADH1CP00326 375 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 NR3C1P04150 777 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 APODP05090 189 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 ZDHHC11BP0C7U3 371 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 ADH5P11766 374 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 BCKDHBP21953 392 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 GBP1P32455 592 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 TIE1P35590 1138 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 EIF2DP41214 584 aaKnown RBP12.94□□□□□ -0.34
SNHG4-208ENST00000514110 NDST1P52848 882 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 MRPS21P82921 87 aaKnown RBP12.94□□□□□ -0.34
SNHG4-208ENST00000514110 CREB5Q02930 508 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 KDSRQ06136 332 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 CRY1Q16526 586 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 SGSM1Q2NKQ1 1148 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 ZACNQ401N2 412 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 USP39Q53GS9 565 aaKnown RBP12.94□□□□□ -0.34
SNHG4-208ENST00000514110 LY6G5CQ5SRR4 150 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 SPOPLQ6IQ16 392 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 PHTF2Q8N3S3 785 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
SNHG4-208ENST00000514110 MDGA1Q8NFP4 955 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 CNOT6LQ96LI5 555 aaKnown RBP12.94□□□□□ -0.34
SNHG4-208ENST00000514110 ZDHHC4Q9NPG8 344 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 TBC1D14Q9P2M4 693 aa12.94□□□□□ -0.34
SNHG4-208ENST00000514110 A0A0A0MRY4 1105 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 SGK1O00141 431 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 CAVIN2O95810 425 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 RPN1P04843 607 aaKnown RBP12.93□□□□□ -0.34
SNHG4-208ENST00000514110 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 IRF1P10914 325 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 CMA1P23946 247 aa12.93□□□□□ -0.34
SNHG4-208ENST00000514110 GRIA2P42262 883 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms