RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 BCAR3O75815 825 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 USP1O94782 785 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 KIF20AO95235 890 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 MALP21145 153 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 PCSK6P29122 969 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 LIPAP38571 399 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 CLCN2P51788 898 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 GPSM2P81274 684 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 KHDC1Q4VXA5 237 aaKnown RBP4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 RNF219Q5W0B1 726 aaPredicted RBP4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 TMEM108Q6UXF1 575 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 GALNT4Q8N4A0 578 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 NRACQ8N912 160 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 ACRBPQ8NEB7 543 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 MARK4Q96L34 752 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 CDK19Q9BWU1 502 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 GLOD4Q9HC38 313 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 SERHLQ9NQF3 203 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 TFCP2L1Q9NZI6 479 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 PI4KBQ9UBF8 816 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 USP6P35125 1406 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 EDC4Q6P2E9 1401 aaKnown RBP4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 RGPD5Q99666 1765 aa4.45□□□□□ -1.7
ATP2C1-220ENST00000513636 PXDNQ92626 1479 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 POLR3AO14802 1390 aaPredicted RBP4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 COL22A1Q8NFW1 1626 aaPredicted RBP4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 CCDC154A6NI56 674 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 E5RJQ4 531 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 GPR39O43194 453 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 EXOC3O60645 756 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 OAZ2O95190 189 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 IL6RP08887 468 aaPredicted RBP4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 RARBP10826 455 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 ATF3P18847 181 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 PHKA1P46020 1223 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 GHRHRQ02643 423 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 ZNF268Q14587 947 aaPredicted RBP4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 TWIST1Q15672 202 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 SLC4A10Q6U841 1118 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 MAVSQ7Z434 540 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 USP37Q86T82 979 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 FAM109AQ8N4B1 249 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 AFAP1L2Q8N4X5 818 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 ABHD11Q8NFV4 315 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 ATL2Q8NHH9 583 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 C16orf52Q8NHV5 167 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 RP9Q8TA86 221 aaKnown RBP4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 COG1Q8WTW3 980 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 XAGE5Q8WWM1 108 aa4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 DDX17Q92841 729 aaKnown RBP4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 CPSF1Q10570 1443 aaKnown RBP4.44□□□□□ -1.7
ATP2C1-220ENST00000513636 KTN1Q86UP2 1357 aaKnown RBP4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 FAM208AQ9UK61 1670 aaKnown RBP4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 H7C1Q1 480 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 HTRA2O43464 458 aaPredicted RBP4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 FESP07332 822 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 RBMS2Q15434 407 aaKnown RBP4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 MEPCEQ7L2J0 689 aaKnown RBP4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 KAT5Q92993 513 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 MACROD1Q9BQ69 325 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 FSD1LQ9BXM9 530 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 FOXP1Q9H334 677 aaPredicted RBP4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 GPR35Q9HC97 309 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 LIMCH1Q9UPQ0 1083 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 VIRMAQ69YN4 1812 aaKnown RBP4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 OVOS2A0A0J9YW53 1432 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 TNS3Q68CZ2 1445 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 OVOS2Q6IE36 1432 aa4.43□□□□□ -1.7
ATP2C1-220ENST00000513636 RGPD2P0DJD1 1756 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 BRD4O60885 1362 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 NSD2O96028 1365 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 SLIT3O75094 1523 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 NFAT5O94916 1531 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 PLCH1Q4KWH8 1693 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 WNK3Q9BYP7 1800 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 TRIM75PA6NK02 468 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 CHRM5P08912 532 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 DLDP09622 509 aaKnown RBP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 ATP5F1P24539 256 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 PIK3CGP48736 1102 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 TPTEP56180 551 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 LINC00205P59089 165 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 ERVK-21P61565 698 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 KIF23Q02241 960 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 DDX10Q13206 875 aaKnown RBP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 SNAPC2Q13487 334 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 SEMA3AQ14563 771 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 SSH2Q76I76 1423 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 TNPO1Q92973 898 aaKnown RBP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 RITA1Q96K30 269 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 LYZL4Q96KX0 146 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 DPCDQ9BVM2 203 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 TINAGL1Q9GZM7 467 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 PEAK1Q9H792 1746 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 POT1Q9NUX5 634 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 TERF2IPQ9NYB0 399 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 TUBD1Q9UJT1 453 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 SERTAD3Q9UJW9 196 aa4.42□□□□□ -1.7
ATP2C1-220ENST00000513636 MRFAP1Q9Y605 127 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms