RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 MRGPRX1Q96LB2 322 aa11.97□□□□□ -0.49
RNF4-218ENST00000513284 TTLL2Q9BWV7 592 aa11.97□□□□□ -0.49
RNF4-218ENST00000513284 FOXP1Q9H334 677 aaPredicted RBP11.97□□□□□ -0.49
RNF4-218ENST00000513284 GAREM1Q9H706 876 aa11.97□□□□□ -0.49
RNF4-218ENST00000513284 TM7SF3Q9NS93 570 aa11.97□□□□□ -0.49
RNF4-218ENST00000513284 PCDHB6Q9Y5E3 794 aa11.97□□□□□ -0.49
RNF4-218ENST00000513284 STYXL1Q9Y6J8 313 aa11.97□□□□□ -0.49
RNF4-218ENST00000513284 KNL1Q8NG31 2342 aa11.97□□□□□ -0.49
RNF4-218ENST00000513284 GOLGA8CPA6NN73 597 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 WASH3PC4AMC7 463 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 PRRT4C9JH25 899 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 SLC9A3R1O14745 358 aaPredicted RBP11.96□□□□□ -0.49
RNF4-218ENST00000513284 OAS1P00973 400 aaKnown RBP11.96□□□□□ -0.49
RNF4-218ENST00000513284 PLA2G4BP0C869 781 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 ADSSP30520 456 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 EIF2S3P41091 472 aaKnown RBP11.96□□□□□ -0.49
RNF4-218ENST00000513284 PTPRNQ16849 979 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 SOWAHAQ2M3V2 549 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 HLA-BQ31612 363 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 TMEM25Q86YD3 366 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 SPATA2LQ8IUW3 424 aaPredicted RBP11.96□□□□□ -0.49
RNF4-218ENST00000513284 C1orf127Q8N9H9 656 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 ZSWIM2Q8NEG5 633 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 RHBDD1Q8TEB9 315 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 FUBP3Q96I24 572 aaKnown RBP eCLIP11.96□□□□□ -0.49
RNF4-218ENST00000513284 C8orf76Q96K31 380 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 RAB34Q9BZG1 259 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 GDAP2Q9NXN4 497 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 TRPM5Q9NZQ8 1165 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 LARSQ9P2J5 1176 aaKnown RBP11.96□□□□□ -0.49
RNF4-218ENST00000513284 SUSD2Q9UGT4 822 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 NOL7Q9UMY1 257 aaKnown RBP11.96□□□□□ -0.49
RNF4-218ENST00000513284 AGAP1Q9UPQ3 857 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 RAD54BQ9Y620 910 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 SLCO1B1Q9Y6L6 691 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 KNTC1P50748 2209 aa11.96□□□□□ -0.49
RNF4-218ENST00000513284 HECTD1Q9ULT8 2610 aa11.96□□□□□ -0.5
RNF4-218ENST00000513284 PTPRQQ9UMZ3 2332 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 A0A1B0GTW7 788 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.95□□□□□ -0.5
RNF4-218ENST00000513284 J3QKU1 62 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 HOXC11O43248 304 aaPredicted RBP11.95□□□□□ -0.5
RNF4-218ENST00000513284 ADH1CP00326 375 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 GNSP15586 552 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 BDNFP23560 247 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 POLR2BP30876 1174 aaKnown RBP11.95□□□□□ -0.5
RNF4-218ENST00000513284 TRAPPC10P48553 1259 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 PDE6CP51160 858 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 HMGN5P82970 282 aaKnown RBP11.95□□□□□ -0.5
RNF4-218ENST00000513284 GTF2BQ00403 316 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 GAD2Q05329 585 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 ZRSR1Q15695 479 aaKnown RBP11.95□□□□□ -0.5
RNF4-218ENST00000513284 C10orf76Q5T2E6 689 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 SYCP2LQ5T4T6 812 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 ADALQ6DHV7 355 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 LIMS2Q7Z4I7 341 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 GALNT15Q8N3T1 639 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 TERB1Q8NA31 727 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 FAM184AQ8NB25 1140 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 GABRG3Q99928 467 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 REEP2Q9BRK0 252 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 LLPHQ9BRT6 129 aaKnown RBP11.95□□□□□ -0.5
RNF4-218ENST00000513284 TRIM9Q9C026 710 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 CRTAC1Q9NQ79 661 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 TMEM30AQ9NV96 361 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 WSB2Q9NYS7 404 aaPredicted RBP11.95□□□□□ -0.5
RNF4-218ENST00000513284 DEC1Q9P2X7 70 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.95□□□□□ -0.56e-6■■■■■ 55.1
RNF4-218ENST00000513284 NME7Q9Y5B8 376 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 PCDHGB2Q9Y5G2 931 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 CABIN1Q9Y6J0 2220 aa11.95□□□□□ -0.5
RNF4-218ENST00000513284 E2F8A0AVK6 867 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 KCNJ18B7U540 433 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 H0YCG3 227 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 PLK4O00444 970 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 TRIM66O15016 1216 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 HUS1O60921 280 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 NDUFS2O75306 463 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 ITGB3P05106 788 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 PLCG1P19174 1290 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 ZNF131P52739 623 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 CACNA2D1P54289 1103 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 CLDN6P56747 220 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 MYL7Q01449 175 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 POU5F1Q01860 360 aaKnown RBP11.94□□□□□ -0.5
RNF4-218ENST00000513284 TAF10Q12962 218 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 WDR45BQ5MNZ6 344 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 DENND5BQ6ZUT9 1274 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 TRMT11Q7Z4G4 463 aaKnown RBP11.94□□□□□ -0.5
RNF4-218ENST00000513284 LURAP1LQ8IV03 231 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 BBS7Q8IWZ6 715 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 TMEM86AQ8N2M4 240 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 ZCCHC9Q8N567 271 aaKnown RBP11.94□□□□□ -0.5
RNF4-218ENST00000513284 FBXO18Q8NFZ0 1043 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 KBTBD7Q8WVZ9 684 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 FOXJ1Q92949 421 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 TOE1Q96GM8 510 aaKnown RBP11.94□□□□□ -0.5
RNF4-218ENST00000513284 CDC6Q99741 560 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 ITM2CQ9NQX7 267 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms