RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 Q6ZWC4 215 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 TXLNBQ8N3L3 684 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 ZNF384Q8TF68 577 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 RSPRY1Q96DX4 576 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 HIST1H2AAQ96QV6 131 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 MYD88Q99836 296 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 EIF2AQ9BY44 585 aaKnown RBP6.4□□□□□ -1.38
CHD1-209ENST00000512844 ALG13Q9NP73 1137 aaKnown RBP6.4□□□□□ -1.38
CHD1-209ENST00000512844 SNX15Q9NRS6 342 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 SH3BP4Q9P0V3 963 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 PTGFRNQ9P2B2 879 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 DNAJB11Q9UBS4 358 aa6.4□□□□□ -1.38
CHD1-209ENST00000512844 JTBO76095 146 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 VNN1O95497 513 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 ELFN1P0C7U0 828 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 MYL4P12829 197 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 HGFP14210 728 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 L1TD1Q5T7N2 865 aaKnown RBP6.39□□□□□ -1.39
CHD1-209ENST00000512844 KLHDC7AQ5VTJ3 777 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 FCRL6Q6DN72 434 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 PARD3BQ8TEW8 1205 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 CCDC138Q96M89 665 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 COLEC11Q9BWP8 271 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 NAA15Q9BXJ9 866 aaKnown RBP6.39□□□□□ -1.39
CHD1-209ENST00000512844 HPSEQ9Y251 543 aa6.39□□□□□ -1.39
CHD1-209ENST00000512844 POLR2AP24928 1970 aaKnown RBP6.38□□□□□ -1.39
CHD1-209ENST00000512844 M0R3H8 397 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 AP4M1O00189 453 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 CCNT2O60583 730 aaKnown RBP6.38□□□□□ -1.39
CHD1-209ENST00000512844 PROP1O75360 226 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 JUPP14923 745 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 TSHRP16473 764 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 FGFR2P21802 821 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 CD38P28907 300 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 NEK3P51956 506 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 E2F1Q01094 437 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 GRM1Q13255 1194 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 KCNAB1Q14722 419 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 ARL13BQ3SXY8 428 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 NAPRTQ6XQN6 538 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 DPY19L3Q6ZPD9 716 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 DAZAP1Q96EP5 407 aaKnown RBP6.38□□□□□ -1.39
CHD1-209ENST00000512844 VPS50Q96JG6 964 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 ZBTB45Q96K62 511 aaPredicted RBP6.38□□□□□ -1.39
CHD1-209ENST00000512844 FSD1LQ9BXM9 530 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 TRIM36Q9NQ86 728 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 ARPP21Q9UBL0 812 aaPredicted RBP6.38□□□□□ -1.39
CHD1-209ENST00000512844 DKK4Q9UBT3 224 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 NKX1-2Q9UD57 310 aaPredicted RBP6.38□□□□□ -1.39
CHD1-209ENST00000512844 STEAP1Q9UHE8 339 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 AMFRQ9UKV5 643 aa6.38□□□□□ -1.39
CHD1-209ENST00000512844 CLCA1A8K7I4 914 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 RASA4BC9J798 803 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 AREL1O15033 823 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 RASA4O43374 803 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 COQ9O75208 318 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 A1BGP04217 495 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 ERBB2P04626 1255 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 MYCLP12524 364 aaPredicted RBP6.37□□□□□ -1.39
CHD1-209ENST00000512844 CREB1P16220 341 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 TNFSF4P23510 183 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 YY1P25490 414 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 PCSK6P29122 969 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 CTGFP29279 349 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 GKP32189 559 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 TIRAPP58753 221 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 HTRA4P83105 476 aaPredicted RBP6.37□□□□□ -1.39
CHD1-209ENST00000512844 ST3GAL2Q16842 350 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 ZNF362Q5T0B9 420 aaPredicted RBP6.37□□□□□ -1.39
CHD1-209ENST00000512844 FBXO38Q6PIJ6 1188 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 USP17L6PQ6QN14 398 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 PRIMA1Q86XR5 153 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 FSTL5Q8N475 847 aaPredicted RBP6.37□□□□□ -1.39
CHD1-209ENST00000512844 RIPOR3Q96MK2 946 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 SLC25A32Q9H2D1 315 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 R3HDMLQ9H3Y0 253 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 TMOD4Q9NZQ9 345 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 PHTF1Q9UMS5 762 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 GABRQQ9UN88 632 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 COX11Q9Y6N1 276 aa6.37□□□□□ -1.39
CHD1-209ENST00000512844 TARM1B6A8C7 271 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 EXOC5O00471 708 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 EXOC3O60645 756 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 PMPCBO75439 489 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 TJP3O95049 919 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 RBL1P28749 1068 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 TIAL1Q01085 375 aaKnown RBP eCLIP6.36□□□□□ -1.39
CHD1-209ENST00000512844 BRD3Q15059 726 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 FAM209BQ5JX69 171 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 FAXCQ5TGI0 409 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 CLEC9AQ6UXN8 241 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 SERPINA13PQ6UXR4 307 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 TRIM72Q6ZMU5 477 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 CATSPERGQ6ZRH7 1159 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 PTF1AQ7RTS3 328 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 KRT28Q7Z3Y7 464 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 PRR25Q96S07 402 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 CERS4Q9HA82 394 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 MYO1AQ9UBC5 1043 aa6.36□□□□□ -1.39
CHD1-209ENST00000512844 CAPN11Q9UMQ6 739 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms