RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 SFRP4Q6FHJ7 346 aaPredicted RBP8.24□□□□□ -1.09
RFC1-214ENST00000512726 ACAD10Q6JQN1 1059 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 SPOCD1Q6ZMY3 1216 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 SYT13Q7L8C5 426 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 RHOT2Q8IXI1 618 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 SP8Q8IXZ3 490 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 SLC15A3Q8IY34 581 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 NGDNQ8NEJ9 315 aaKnown RBP8.24□□□□□ -1.09
RFC1-214ENST00000512726 ADAMTS18Q8TE60 1221 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 HMGB4Q8WW32 186 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 DACT3Q96B18 629 aaPredicted RBP8.24□□□□□ -1.09
RFC1-214ENST00000512726 LRRC37BQ96QE4 947 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 MPHOSPH9Q99550 1183 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 PLA2G12BQ9BX93 195 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 ABHD16BQ9H3Z7 469 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 ZFP64Q9NPA5 681 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 KCND3Q9UK17 655 aa8.24□□□□□ -1.09
RFC1-214ENST00000512726 A0A1W2PPH5 198 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 DHHO43323 396 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 B4GALT3O60512 393 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 RPP40O75818 363 aaKnown RBP8.23□□□□□ -1.09
RFC1-214ENST00000512726 KCNA2P16389 499 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 RBL1P28749 1068 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 GATMP50440 423 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 ADAM17P78536 824 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 SLC9C2Q5TAH2 1124 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 ARHGAP40Q5TG30 622 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 RGS7BPQ6MZT1 257 aaPredicted RBP8.23□□□□□ -1.09
RFC1-214ENST00000512726 FOXR2Q6PJQ5 311 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 ARHGEF18Q6ZSZ5 1173 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 SYT12Q8IV01 421 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 TDRD7Q8NHU6 1098 aaKnown RBP8.23□□□□□ -1.09
RFC1-214ENST00000512726 VSX1Q9NZR4 365 aaPredicted RBP8.23□□□□□ -1.09
RFC1-214ENST00000512726 CTTNBP2NLQ9P2B4 639 aa8.23□□□□□ -1.09
RFC1-214ENST00000512726 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.23□□□□□ -1.09
RFC1-214ENST00000512726 FSD2A1L4K1 749 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 TCAF2A6NFQ2 919 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 PGPEP1LA6NFU8 196 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 BTBD11A6QL63 1104 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 SUN1O94901 812 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 LARGE1O95461 756 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 RPS6KB1P23443 525 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 NTSR1P30989 418 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 AFF3P51826 1226 aaKnown RBP8.22□□□□□ -1.09
RFC1-214ENST00000512726 ATXN1P54253 815 aaKnown RBP8.22□□□□□ -1.09
RFC1-214ENST00000512726 SF3A3Q12874 501 aaKnown RBP eCLIP8.22□□□□□ -1.09
RFC1-214ENST00000512726 KRT32Q14532 448 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 GALNTL6Q49A17 601 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 DCAF17Q5H9S7 520 aaPredicted RBP8.22□□□□□ -1.09
RFC1-214ENST00000512726 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.22□□□□□ -1.09
RFC1-214ENST00000512726 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.22□□□□□ -1.09
RFC1-214ENST00000512726 TRABD2AQ86V40 505 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 MB21D1Q8N884 522 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 LINC01356Q8N9X3 169 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 ADAMTS15Q8TE58 950 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 TMEM171Q8WVE6 324 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 TIGD1Q96MW7 591 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 NUDT16L1Q9BRJ7 211 aaKnown RBP8.22□□□□□ -1.09
RFC1-214ENST00000512726 TMLHEQ9NVH6 421 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 HSFX1Q9UBD0 423 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 ORC3Q9UBD5 711 aaPredicted RBP8.22□□□□□ -1.09
RFC1-214ENST00000512726 DNAJC16Q9Y2G8 782 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 TTLL3Q9Y4R7 772 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 SPATA31A3Q5VYP0 1347 aa8.22□□□□□ -1.09
RFC1-214ENST00000512726 KIF28PB7ZC32 967 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 CER1O95813 267 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 LMNAP02545 664 aaKnown RBP8.21□□□□□ -1.1
RFC1-214ENST00000512726 EPHA3P29320 983 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 UQCRC1P31930 480 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 NDUFV1P49821 464 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 ANXA11P50995 505 aaKnown RBP8.21□□□□□ -1.1
RFC1-214ENST00000512726 PPP2CBP62714 309 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 PPP2CAP67775 309 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 P3H1Q32P28 736 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 HAUS3Q68CZ6 603 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 DGAT2L7PQ6IED9 249 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 ATG14Q6ZNE5 492 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 CLNKQ7Z7G1 428 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 FSTL5Q8N475 847 aaPredicted RBP8.21□□□□□ -1.1
RFC1-214ENST00000512726 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.21□□□□□ -1.1
RFC1-214ENST00000512726 ANKRD52Q8NB46 1076 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 ZNF483Q8TF39 744 aaPredicted RBP8.21□□□□□ -1.1
RFC1-214ENST00000512726 ZBTB45Q96K62 511 aaPredicted RBP8.21□□□□□ -1.1
RFC1-214ENST00000512726 WDR24Q96S15 920 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 GPR20Q99678 358 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 LIN7CQ9NUP9 197 aaKnown RBP8.21□□□□□ -1.1
RFC1-214ENST00000512726 PLA2G3Q9NZ20 509 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 BAG5Q9UL15 447 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.21□□□□□ -1.1
RFC1-214ENST00000512726 SH3BP1Q9Y3L3 701 aa8.21□□□□□ -1.1
RFC1-214ENST00000512726 STX16-NPEPL1H3BU86 382 aa8.2□□□□□ -1.1
RFC1-214ENST00000512726 STX16O14662 325 aa8.2□□□□□ -1.1
RFC1-214ENST00000512726 USO1O60763 962 aaKnown RBP8.2□□□□□ -1.1
RFC1-214ENST00000512726 ERN1O75460 977 aaKnown RBP8.2□□□□□ -1.1
RFC1-214ENST00000512726 TMEM63AO94886 807 aa8.2□□□□□ -1.1
RFC1-214ENST00000512726 YY1P25490 414 aa8.2□□□□□ -1.1
RFC1-214ENST00000512726 MAGEA10P43363 369 aaPredicted RBP8.2□□□□□ -1.1
RFC1-214ENST00000512726 MTHFSP49914 203 aa8.2□□□□□ -1.1
RFC1-214ENST00000512726 PDE6CP51160 858 aa8.2□□□□□ -1.1
RFC1-214ENST00000512726 NHLH2Q02577 135 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms