RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 DTNBO60941 627 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ARF4P18085 180 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 GPC1P35052 558 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 RDXP35241 583 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 TCF7P36402 384 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ARL3P36405 182 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ATXN3P54252 364 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 PLTPP55058 493 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 CASP9P55211 416 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 EPS8Q12929 822 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 MTX1Q13505 466 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 DPY19L1Q2PZI1 675 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 LRSAM1Q6UWE0 723 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ARHGEF39Q8N4T4 335 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 PRCCQ92733 491 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 APOPT1Q96IL0 206 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 SPATA13Q96N96 652 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 REEP2Q9BRK0 252 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 TACO1Q9BSH4 297 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 WDR18Q9BV38 432 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 SEPSECSQ9HD40 501 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 P4HTMQ9NXG6 502 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 DDX43Q9NXZ2 648 aaKnown RBP6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 EXTL2Q9UBQ6 330 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ATP11BQ9Y2G3 1177 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 ZNF281Q9Y2X9 895 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 SNX9Q9Y5X1 595 aa6.64□□□□□ -1.35
TRAPPC11-209ENST00000512476 UHRF1BP1Q6BDS2 1440 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 GOLGA6L7A0A1B0GV03 622 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 GNAT3A8MTJ3 354 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 PGRMC2O15173 223 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 KCNJ13O60928 360 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 POP4O95707 220 aaKnown RBP6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 B3GALT4O96024 378 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 ANXA6P08133 673 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 CKBP12277 381 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 AVPR2P30518 371 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 IL13P35225 146 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 GBX2P52951 348 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 UBE2HP62256 183 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 MYO1EQ12965 1108 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 ITGA7Q13683 1181 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 GPR68Q15743 365 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 KCTD21Q4G0X4 260 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 CCDC40Q4G0X9 1142 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 CLEC17AQ6ZS10 378 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 TXNRD3Q86VQ6 643 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 MFSD2AQ8NA29 543 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 OR2I1PQ8NGU4 316 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 RHBDD1Q8TEB9 315 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 DCAF4Q8WV16 495 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 ANKRD7Q92527 254 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 RMDN1Q96DB5 314 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 NRBF2Q96F24 287 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 CYP4F12Q9HCS2 524 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 GPR108Q9NPR9 543 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 DPP7Q9UHL4 492 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 PCDHA6Q9UN73 950 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 DNAJC16Q9Y2G8 782 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 TRPV2Q9Y5S1 764 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 CLTCL1P53675 1640 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 AGLP35573 1532 aa6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 ZC3H13Q5T200 1668 aaKnown RBP6.63□□□□□ -1.35
TRAPPC11-209ENST00000512476 RNGTTO60942 597 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 ERLIN1O75477 346 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 PPM1BO75688 479 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 ITGA5P08648 1049 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CSF2RAP15509 400 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 EPS15P42566 896 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CDK17Q00537 523 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 GAS6Q14393 721 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 EFTUD2Q15029 972 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 IFI16Q16666 785 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 HADHQ16836 314 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 SFMBT2Q5VUG0 894 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CES4AQ5XG92 561 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CPZQ66K79 652 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CENPPQ6IPU0 288 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 C12orf40Q86WS4 652 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 WDR63Q8IWG1 891 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 AGGF1Q8N302 714 aaeCLIP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CRACR2BQ8N4Y2 399 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CNNM3Q8NE01 707 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 LRCH3Q96II8 777 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 MCMBPQ9BTE3 642 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 UTP14AQ9BVJ6 771 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CLEC4MQ9H2X3 399 aaPredicted RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 IPPKQ9H8X2 491 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 IL21Q9HBE4 155 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 PALMDQ9NP74 551 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 ARHGAP20Q9P2F6 1191 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 PI4KBQ9UBF8 816 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 TEKT2Q9UIF3 430 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 FBXL21Q9UKT6 434 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 TBX20Q9UMR3 447 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 DAPP1Q9UN19 280 aa6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 FCF1Q9Y324 198 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 MRPL11Q9Y3B7 192 aaKnown RBP6.62□□□□□ -1.35
TRAPPC11-209ENST00000512476 CAMSAP1Q5T5Y3 1602 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms