RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 MAN2B1O00754 1011 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 CYP26A1O43174 497 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 COCHO43405 550 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 OAS1P00973 400 aaKnown RBP16.78■□□□□ 0.28
DDX41-214ENST00000512334 DCNP07585 359 aaKnown RBP16.78■□□□□ 0.28
DDX41-214ENST00000512334 PON1P27169 355 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 MFAP3P55082 362 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 TNK2Q07912 1038 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 USP4Q13107 963 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 ZNF77Q15935 545 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 TCP11X2Q5H9J9 407 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 TRIM68Q6AZZ1 485 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 ENOSF1Q7L5Y1 443 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 PIGZQ86VD9 579 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 TTC30AQ86WT1 665 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 PJA1Q8NG27 643 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 RIN3Q8TB24 985 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 FAM81BQ96LP2 452 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 DDX23Q9BUQ8 820 aaKnown RBP16.78■□□□□ 0.28
DDX41-214ENST00000512334 EBF3Q9H4W6 596 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 CCSER2Q9H7U1 834 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 LTB4R2Q9NPC1 389 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 GTSE1Q9NYZ3 720 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 NDRG2Q9UN36 371 aaKnown RBP16.78■□□□□ 0.28
DDX41-214ENST00000512334 SCML2Q9UQR0 700 aa16.78■□□□□ 0.28
DDX41-214ENST00000512334 MRPS17Q9Y2R5 130 aaKnown RBP16.78■□□□□ 0.28
DDX41-214ENST00000512334 HELZP42694 1942 aaKnown RBP16.78■□□□□ 0.28
DDX41-214ENST00000512334 ZNF318Q5VUA4 2279 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 COL4A2P08572 1712 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 FAM170BA6NMN3 283 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 LEFTY2O00292 366 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 O00370 1275 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 OLFM2O95897 454 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 CALCAP01258 141 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 ZDHHC11BP0C7U3 371 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 BRD2P25440 801 aaKnown RBP16.77■□□□□ 0.28
DDX41-214ENST00000512334 EEF1GP26641 437 aaKnown RBP16.77■□□□□ 0.28
DDX41-214ENST00000512334 SOX9P48436 509 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 IFNAR2P48551 515 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 TUBP50607 506 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 KIF11P52732 1056 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 SLC7A9P82251 487 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 APBA1Q02410 837 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 TYRO3Q06418 890 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 PDE4CQ08493 712 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 BST2Q10589 180 aaKnown RBP16.77■□□□□ 0.28
DDX41-214ENST00000512334 ARHGAP44Q17R89 818 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 MIIPQ5JXC2 388 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 SNX30Q5VWJ9 437 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 UBA3Q8TBC4 463 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 TFAP2BQ92481 460 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 FAM3CQ92520 227 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 PRRX2Q99811 253 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 KCNH6Q9H252 994 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 C8orf33Q9H7E9 229 aaPredicted RBP16.77■□□□□ 0.28
DDX41-214ENST00000512334 DUS2Q9NX74 493 aaKnown RBP16.77■□□□□ 0.28
DDX41-214ENST00000512334 TAB2Q9NYJ8 693 aa16.77■□□□□ 0.28
DDX41-214ENST00000512334 MTF2Q9Y483 593 aaPredicted RBP16.77■□□□□ 0.28
DDX41-214ENST00000512334 A0A1W2PQH9 124 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 M0QYV0 167 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 TULP2O00295 520 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 XPO1O14980 1071 aaKnown RBP16.76■□□□□ 0.27
DDX41-214ENST00000512334 TPM2P07951 284 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 GLULP15104 373 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 ARSAP15289 507 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 TARSP26639 723 aaKnown RBP16.76■□□□□ 0.27
DDX41-214ENST00000512334 USP8P40818 1118 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 PGFP49763 221 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 ZXDBP98169 803 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 MYL5Q02045 173 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 RUNX3Q13761 415 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 PDGFRLQ15198 375 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 STILQ15468 1287 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 ITPRIPL2Q3MIP1 535 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 OSCP1Q8WVF1 389 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 MSANTD3Q96H12 275 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 FAM83CQ9BQN1 747 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 UBXN6Q9BZV1 441 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 LRRC4Q9HBW1 653 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 FANCLQ9NW38 375 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 NAGPAQ9UK23 515 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 WNT6Q9Y6F9 365 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 MIA3Q5JRA6 1907 aa16.76■□□□□ 0.27
DDX41-214ENST00000512334 KIF26AQ9ULI4 1882 aaPredicted RBP16.76■□□□□ 0.27
DDX41-214ENST00000512334 SPECC1L-ADORA2AF8WAN1 911 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 NCAM2O15394 837 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 TLR5O60602 858 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 SETSIPP0DME0 302 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 TCF3P15923 654 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 TKTL1P51854 596 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 ZNF132P52740 706 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 CNGA2Q16280 664 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 CDKAL1Q5VV42 579 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 LCLAT1Q6UWP7 414 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 CCDC186Q7Z3E2 898 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 DDX42Q86XP3 938 aaKnown RBP eCLIP16.75■□□□□ 0.27
DDX41-214ENST00000512334 CCDC105Q8IYK2 499 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 DTWD2Q8NBA8 298 aa16.75■□□□□ 0.27
DDX41-214ENST00000512334 PRSS33Q8NF86 280 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms