RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 EMC3Q9P0I2 261 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 AK9Q5TCS8 1911 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 POM121BA6NF01 834 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ACOD1A6NK06 481 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ASAP2O43150 1006 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZC3H11AO75152 810 aaKnown RBP eCLIP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ESRRAP11474 423 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ANXA13P27216 316 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 PLCD1P51178 756 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 CCR9P51686 369 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF157P51786 506 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 KPNA1P52294 538 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF445P59923 1031 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ARHGAP8P85298 464 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 MC1RQ01726 317 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 CREMQ03060 361 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 TRIM32Q13049 653 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 GALNT3Q14435 633 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 UBE3CQ15386 1083 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 TCTE1Q5JU00 501 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM26FQ5R3K3 315 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 NANOGNBQ7Z5D8 188 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 TTC7BQ86TV6 843 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 NIPA2Q8N8Q9 360 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 CLRN3Q8NCR9 226 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 SLC44A5Q8NCS7 719 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 INTS12Q96CB8 462 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 DYNLL2Q96FJ2 89 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 MRIQ9BWK5 157 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 NUP62CLQ9H1M0 184 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 IL25Q9H293 177 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 STN1Q9H668 368 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 COPS7BQ9H9Q2 264 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ELP3Q9H9T3 547 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 FANCEQ9HB96 536 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 EMC7Q9NPA0 242 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 EIF2B3Q9NR50 452 aaKnown RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 UBA2Q9UBT2 640 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 SERTAD1Q9UHV2 236 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 DACH1Q9UI36 760 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZNF215Q9UL58 517 aaPredicted RBP5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 WDR37Q9Y2I8 494 aa5.28□□□□□ -1.56
TRAPPC11-208ENST00000511955 SSC5DA1L4H1 1573 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 A0A1W2PQU0 124 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 H0YCG3 227 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 PRDM1O75626 825 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 TUSC2O75896 110 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 GDF11O95390 407 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZFYP08048 801 aaPredicted RBP5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 TPBGLP0DKB5 382 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 PRG2P13727 222 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 HOXB1P14653 301 aaPredicted RBP5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 ARHGDIBP52566 201 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 DSTNP60981 165 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 OLR1P78380 273 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 KCNJ10P78508 379 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 MAP4K2Q12851 820 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 GNA13Q14344 377 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 VEPH1Q14D04 833 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 CRY1Q16526 586 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 LRIT3Q3SXY7 679 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 FBXO47Q5MNV8 452 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 TEX35Q5T0J7 233 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 CAVIN1Q6NZI2 390 aaKnown RBP5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 AAGABQ6PD74 315 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 ADGRG6Q86SQ4 1221 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 STK32CQ86UX6 486 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 FAM83AQ86UY5 434 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 PACS2Q86VP3 889 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 SULF2Q8IWU5 870 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRMT44Q8IYL2 757 aaKnown RBP5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 SCYL3Q8IZE3 742 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF565Q8N9K5 539 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZSCAN1Q8NBB4 408 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 ARMC2Q8NEN0 867 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 DNAJB8Q8NHS0 232 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 CCDC110Q8TBZ0 833 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 SGK3Q96BR1 496 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 OTUD5Q96G74 571 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 SCLYQ96I15 445 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 IFT74Q96LB3 600 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 CDK5RAP1Q96SZ6 601 aaKnown RBP5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 RUFY1Q96T51 708 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 SPXQ9BT56 116 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 IDI2Q9BXS1 227 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 REXO4Q9GZR2 422 aaKnown RBP5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 INTS2Q9H0H0 1204 aaKnown RBP5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 VPS16Q9H269 839 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 XKR8Q9H6D3 395 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 DCP1AQ9NPI6 582 aaPredicted RBP5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 KCND1Q9NSA2 647 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 DECR2Q9NUI1 292 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 SPATS2LQ9NUQ6 558 aaKnown RBP5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 PSME2Q9UL46 239 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 TMEM5Q9Y2B1 443 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 ATP6V1DQ9Y5K8 247 aa5.27□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRAV20A0A0B4J274 112 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 GOLGA6L7A0A1B0GV03 622 aa5.26□□□□□ -1.57
TRAPPC11-208ENST00000511955 LGALS16A8MUM7 142 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms