RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 SMC2O95347 1197 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 USP17L7P0C7H9 530 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 C1QTNF9P0C862 333 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 P4HA1P13674 534 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 CD44P16070 742 aaKnown RBP14.31□□□□□ -0.12
CLDND1-224ENST00000511667 CCNE1P24864 410 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 SOX9P48436 509 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 NDST1P52848 882 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 LRRC63Q05C16 580 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 MTAPQ13126 283 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 PPP2R5DQ14738 602 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 ITPRIPL2Q3MIP1 535 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 KRT39Q6A163 491 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 ANKRD40Q6AI12 368 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 LRSAM1Q6UWE0 723 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 PRR23BQ6ZRT6 265 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 CSGALNACT1Q8TDX6 532 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 ERCC4Q92889 916 aaPredicted RBP14.31□□□□□ -0.12
CLDND1-224ENST00000511667 TWNKQ96RR1 684 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 KCNK16Q96T55 309 aa14.31□□□□□ -0.12
CLDND1-224ENST00000511667 THG1LQ9NWX6 298 aaKnown RBP14.31□□□□□ -0.12
CLDND1-224ENST00000511667 TRAV19A0A0A6YYK7 116 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 GOLGA6L4A6NEF3 574 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 PPP1R3GB7ZBB8 358 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 HHLA1C9JL84 531 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 TRDMT1O14717 391 aaKnown RBP14.3□□□□□ -0.12
CLDND1-224ENST00000511667 CETN3O15182 167 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 CILPO75339 1184 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 KRT13P13646 458 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 PIK3CAP42336 1068 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 FKBP3Q00688 224 aaKnown RBP14.3□□□□□ -0.12
CLDND1-224ENST00000511667 RUNX3Q13761 415 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 MORC3Q14149 939 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 PDGFRLQ15198 375 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 EML3Q32P44 896 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 TMEM196Q5HYL7 178 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 SCARA5Q6ZMJ2 495 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 ACOT1Q86TX2 421 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 NUP93Q8N1F7 819 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 SYNPOQ8N3V7 929 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 ARL14EPQ8N8R7 260 aaPredicted RBP14.3□□□□□ -0.12
CLDND1-224ENST00000511667 OSCP1Q8WVF1 389 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 SMARCE1Q969G3 411 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 SLC35C1Q96A29 364 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 SMARCD1Q96GM5 515 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 ZFRQ96KR1 1074 aaKnown RBP14.3□□□□□ -0.12
CLDND1-224ENST00000511667 HNRNPABQ99729 332 aaKnown RBP14.3□□□□□ -0.12
CLDND1-224ENST00000511667 SMOQ99835 787 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 NIF3L1Q9GZT8 377 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 RNF38Q9H0F5 515 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 LMAN1LQ9HAT1 526 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 DMAP1Q9NPF5 467 aaPredicted RBP14.3□□□□□ -0.12
CLDND1-224ENST00000511667 MAN1B1Q9UKM7 699 aa14.3□□□□□ -0.12
CLDND1-224ENST00000511667 TMEM8BA6NDV4 472 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 BEST1O76090 585 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 RTN3O95197 1032 aaPredicted RBP14.29□□□□□ -0.12
CLDND1-224ENST00000511667 HDCP19113 662 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 ANXA13P27216 316 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 HOXA6P31267 233 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 TUBP50607 506 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 PDE6CP51160 858 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 LIMK1P53667 647 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 TAF10Q12962 218 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 MTF1Q14872 753 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 GAB4Q2WGN9 574 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 DGKKQ5KSL6 1271 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 TTI2Q6NXR4 508 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 UBR7Q8N806 425 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 C12orf29Q8N999 325 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 FBXL13Q8NEE6 735 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 EEF2KMTQ96G04 330 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 DHTKD1Q96HY7 919 aaPredicted RBP14.29□□□□□ -0.12
CLDND1-224ENST00000511667 PNPLA8Q9NP80 782 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 TRPM5Q9NZQ8 1165 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 NDRG2Q9UN36 371 aaKnown RBP14.29□□□□□ -0.12
CLDND1-224ENST00000511667 LHX6Q9UPM6 363 aa14.29□□□□□ -0.12
CLDND1-224ENST00000511667 TRIM49BA6NDI0 452 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 ATP8B3O60423 1300 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 STX10O60499 249 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 EPB41P11171 864 aaKnown RBP14.28□□□□□ -0.12
CLDND1-224ENST00000511667 CHRM1P11229 460 aaPredicted RBP14.28□□□□□ -0.12
CLDND1-224ENST00000511667 CCDC130P13994 396 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 ARSAP15289 507 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 PPP1R2P41236 205 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 MXI1P50539 228 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 SLC5A3P53794 718 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 AASDHQ4L235 1098 aaPredicted RBP14.28□□□□□ -0.12
CLDND1-224ENST00000511667 CBWD6Q4V339 395 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 CBWD3Q5JTY5 395 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 CBWD5Q5RIA9 395 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 TRIM68Q6AZZ1 485 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 CLEC20AQ6ZU45 233 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 SPEM1Q8N4L4 309 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 PDZD8Q8NEN9 1154 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 SCAMP5Q8TAC9 235 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 SLC2A14Q8TDB8 520 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 SH3RF2Q8TEC5 729 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 EBF3Q9H4W6 596 aa14.28□□□□□ -0.12
CLDND1-224ENST00000511667 ASH1LQ9NR48 2969 aaKnown RBP14.28□□□□□ -0.12
CLDND1-224ENST00000511667 RAB20Q9NX57 234 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms