RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MATN4O95460 622 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 ZBED1O96006 694 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 GCSHP23434 173 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 PIK3CGP48736 1102 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 SEC24CP53992 1094 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 GPSM2P81274 684 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 FGL2Q14314 439 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 ARHGEF6Q15052 776 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 LLGL1Q15334 1064 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 AGAP9Q5VTM2 703 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 ZNF365Q70YC5 407 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 RD3Q7Z3Z2 195 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 RHOT2Q8IXI1 618 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 FAM43AQ8N2R8 423 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 FITM2Q8N6M3 262 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 CD99L2Q8TCZ2 262 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 TIFAQ96CG3 184 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 MTFMTQ96DP5 389 aaKnown RBP4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 MASTLQ96GX5 879 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 PHACTR3Q96KR7 559 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 ASB2Q96Q27 587 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 C1orf43Q9BWL3 253 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 PACSIN1Q9BY11 444 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 ARMT1Q9H993 441 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 ZDHHC8Q9ULC8 765 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 PCDHA1Q9Y5I3 950 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 FPGT-TNNI3KV9GXZ4 949 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 SLX4Q8IY92 1834 aa4.39□□□□□ -1.71
TOPBP1-208ENST00000511439 ANKRD26Q9UPS8 1709 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 COL2A1P02458 1487 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 CAPN8A6NHC0 703 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 ZNF185O15231 689 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 CAND2O75155 1236 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 GNAI3P08754 354 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 TYRP1P17643 537 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 ITGB8P26012 769 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 CRKLP46109 303 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 ELLP55199 621 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 GNAI1P63096 354 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 FKBP1BP68106 108 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 KIF22Q14807 665 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 PDCD4Q53EL6 469 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 PRR16Q569H4 304 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 UTP14CQ5TAP6 766 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 EMC10Q5UCC4 262 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 LRCH2Q5VUJ6 765 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 ZKSCAN2Q63HK3 967 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 SWSAP1Q6NVH7 229 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 MAEAQ7L5Y9 396 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 PDSS2Q86YH6 399 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 TBC1D15Q8TC07 691 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 BRIX1Q8TDN6 353 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 NUP133Q8WUM0 1156 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 IP6K1Q92551 441 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 TNPO1Q92973 898 aaKnown RBP4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 NT5C1BQ96P26 610 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 PSMD1Q99460 953 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 PCGF6Q9BYE7 350 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 R3HDMLQ9H3Y0 253 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 BRD9Q9H8M2 597 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 RLIMQ9NVW2 624 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 THEGQ9P2T0 379 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 SLC45A2Q9UMX9 530 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 ATP11BQ9Y2G3 1177 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 USP15Q9Y4E8 981 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 EPN1Q9Y6I3 576 aaPredicted RBP4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 ANKRD31Q8N7Z5 1873 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 CACNA1BQ00975 2339 aa4.38□□□□□ -1.71
TOPBP1-208ENST00000511439 CACNA1SQ13698 1873 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 ADM5C9JUS6 153 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 NPHP1O15259 732 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 AGFG2O95081 481 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 ESRRBO95718 433 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 FOSP01100 380 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 AHSGP02765 367 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 ANXA1P04083 346 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 GJB1P08034 283 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 SRGNP10124 158 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 CDK4P11802 303 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 CKBP12277 381 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 RHCEP18577 417 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 CXCR5P32302 372 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 CLK3P49761 638 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 ATXN1P54253 815 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 NOMO3P69849 1222 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 MRPS5P82675 430 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 RHDQ02161 417 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 SLFN5Q08AF3 891 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 MPP3Q13368 585 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 CNN3Q15417 329 aaKnown RBP4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 SPDYE7PQ495Y7 208 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 NOMO2Q5JPE7 1267 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 KHDC1LQ5JSQ8 128 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 TSHZ3Q63HK5 1081 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 CCSAPQ6IQ19 270 aaPredicted RBP4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 AOPEPQ8N6M6 819 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 FAM156AQ8NDB6 213 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 OR56A1Q8NGH5 318 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 CAGE1Q8TC20 777 aa4.37□□□□□ -1.71
TOPBP1-208ENST00000511439 NTN5Q8WTR8 489 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms