RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
NEK1-206ENST00000510533 NCOA3Q9Y6Q9 1424 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 VPS26AO75436 327 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 ATP6V1G2O95670 118 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 MLH1P40692 756 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 OR1G1P47890 313 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 GLRBP48167 497 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 MMRN1Q13201 1228 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 SNAPC2Q13487 334 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 LAMC2Q13753 1193 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 NFYCQ13952 458 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 DGKDQ16760 1214 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 IZUMO2Q6UXV1 221 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 OTOAQ7RTW8 1153 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 GTF3C2Q8WUA4 911 aaPredicted RBP10.94□□□□□ -0.66
NEK1-206ENST00000510533 FAM172AQ8WUF8 416 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 ICAM1P05362 532 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 CSE1LP55060 971 aaKnown RBP10.94□□□□□ -0.66
NEK1-206ENST00000510533 ORC1Q13415 861 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 OASLQ15646 514 aaKnown RBP10.94□□□□□ -0.66
NEK1-206ENST00000510533 GALNTL6Q49A17 601 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 TMC2Q8TDI7 906 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 CGRRF1Q99675 332 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
NEK1-206ENST00000510533 MADDQ8WXG6 1647 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 PIK3CDO00329 1044 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 CPA3P15088 417 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 NAMPTP43490 491 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 PTENP60484 403 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 PLIN5Q00G26 463 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 PDPK2PQ6A1A2 396 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 TIGD7Q6NT04 549 aaPredicted RBP10.94□□□□□ -0.66
NEK1-206ENST00000510533 STRA8Q7Z7C7 330 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 SLFN11Q7Z7L1 901 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 CD302Q8IX05 232 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 RIN3Q8TB24 985 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 APBB2Q92870 758 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 RGS5O15539 181 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 CLPTM1O96005 669 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 F9P00740 461 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 ODC1P11926 461 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 TCF3P15923 654 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 SOX6P35712 828 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 KRR1Q13601 381 aaKnown RBP10.94□□□□□ -0.66
NEK1-206ENST00000510533 TRIP4Q15650 581 aaPredicted RBP10.94□□□□□ -0.66
NEK1-206ENST00000510533 CYP51A1Q16850 503 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 PARK7Q99497 189 aaKnown RBP10.94□□□□□ -0.66
NEK1-206ENST00000510533 YIPF2Q9BWQ6 316 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 GPATCH2LQ9NWQ4 482 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 NMRK1Q9NWW6 199 aa10.94□□□□□ -0.66
NEK1-206ENST00000510533 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 SPHKAPQ2M3C7 1700 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 IQCA1LA6NCM1 817 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 E9PBE3 544 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 KLHL41O60662 606 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 MAPK1P28482 360 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 TAF1CQ15572 869 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 AMHR2Q16671 573 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 TRMT5Q32P41 509 aaKnown RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 TDRD10Q5VZ19 366 aaKnown RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 ACOT1Q86TX2 421 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 GLMNQ92990 594 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 USP13Q92995 863 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 DDX20Q9UHI6 824 aaKnown RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 PNMA8BQ9ULN7 279 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 AP1G2O75843 785 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 LSM8O95777 96 aaKnown RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 RBP1P09455 135 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 ALOX15P16050 662 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 ACO1P21399 889 aaKnown RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 NPTX2P47972 431 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 TDRD5Q8NAT2 981 aaKnown RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 SLC20A1Q8WUM9 679 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 RPRD1AQ96P16 312 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 CYP4F12Q9HCS2 524 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 CTNNAL1Q9UBT7 734 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 USP18Q9UMW8 372 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 NAALADL1Q9UQQ1 740 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 DRG1Q9Y295 367 aaKnown RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 SNTNA6NMZ2 147 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 SREBF1P36956 1147 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 NME5P56597 212 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 CNTN1Q12860 1018 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 SLC47A2Q86VL8 602 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 FAM9CQ8IZT9 166 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEK1-206ENST00000510533 RAET1EQ8TD07 263 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 CNPY3Q9BT09 278 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 TMEM39BQ9GZU3 492 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 SYBUQ9NX95 663 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 NCKIPSDQ9NZQ3 722 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 ACOT9Q9Y305 439 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 NCF1BA6NI72 391 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 NCF1CA8MVU1 366 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 NR5A2O00482 541 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 AKAP3O75969 853 aa10.93□□□□□ -0.66
NEK1-206ENST00000510533 NCF1P14598 390 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 ZNF177Q13360 481 aaPredicted RBP10.93□□□□□ -0.66
NEK1-206ENST00000510533 PWP1Q13610 501 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms