RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	MYMK	A6NI61	221 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	MEI4	A8MW99	385 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900		M0R2N6	131 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	SGSM2	O43147	1006 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	AFP	P02771	609 aa	Known RBP	10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	CKM	P06732	381 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	USP17L7	P0C7H9	530 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	HOXB2	P14652	356 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	CHML	P26374	656 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	EIF2D	P41214	584 aa	Known RBP	10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	TNFRSF4	P43489	277 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	KDSR	Q06136	332 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	VAC14	Q08AM6	782 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	SLC39A12	Q504Y0	691 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	HIST2H2BC	Q6DN03	193 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	FBXL19	Q6PCT2	694 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	CLEC18B	Q6UXF7	455 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	ATG14	Q6ZNE5	492 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	CLEC18C	Q8NCF0	446 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	C1orf216	Q8TAB5	229 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	PIGO	Q8TEQ8	1089 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	LRRC15	Q8TF66	581 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	RUFY2	Q8WXA3	655 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	ERLEC1	Q96DZ1	483 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	HIC2	Q96JB3	615 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	PSMG3-AS1	Q96PY0	264 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	KIFC3	Q9BVG8	833 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	MIR1-1HG	Q9H1L0	117 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	SLC6A17	Q9H1V8	727 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	TRPC7	Q9HCX4	862 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	ARHGEF4	Q9NR80	690 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	FTSJ1	Q9UET6	329 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	TNFSF13B	Q9Y275	285 aa		10.35	□□□□□ -0.75
PTPN20-223	ENST00000509900	STK36	Q9NRP7	1315 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	KLF18	A0A0U1RQI7	1052 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	BTBD18	B2RXH4	712 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	CBX4	O00257	560 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	SLC27A2	O14975	620 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	PCDHGA12	O60330	932 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	HAPLN1	P10915	354 aa	Predicted RBP	10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	TCF3	P15923	654 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	TYMP	P19971	482 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	GRIA2	P42262	883 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	WAS	P42768	502 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	PCBP4	P57723	403 aa	Known RBP	10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	ZXDB	P98169	803 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	SF3A1	Q15459	793 aa	Known RBP	10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	KIF19	Q2TAC6	998 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	ARMCX5	Q6P1M9	558 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	CHD1L	Q86WJ1	897 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	MIB1	Q86YT6	1006 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	LINC00528	Q8N1L1	170 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	MEIOB	Q8N635	442 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	EXD3	Q8N9H8	876 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	HSD17B14	Q9BPX1	270 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	EIF2AK1	Q9BQI3	630 aa	Known RBP	10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	C22orf23	Q9BZE7	217 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	GCNT4	Q9P109	453 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	MAGED2	Q9UNF1	606 aa	Predicted RBP	10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	SLCO1B1	Q9Y6L6	691 aa		10.34	□□□□□ -0.75
PTPN20-223	ENST00000509900	TRAV19	A0A0A6YYK7	116 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	KCNK3	O14649	394 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	SUV39H1	O43463	412 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	RFPL3	O75679	317 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	VSIG8	P0DPA2	414 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	GSPT1	P15170	499 aa	Known RBP	10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	CD6	P30203	668 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	TNFSF9	P41273	254 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	CSNK1E	P49674	416 aa	Known RBP	10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	GPR15	P49685	360 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	EXOSC10	Q01780	885 aa	Known RBP	10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	REST	Q13127	1097 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	DNAJC3	Q13217	504 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	DHCR24	Q15392	516 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	INF2	Q27J81	1249 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	VASH1	Q7L8A9	365 aa	Predicted RBP	10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	LRRTM3	Q86VH5	581 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	SMC5	Q8IY18	1101 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	ADGRG2	Q8IZP9	1017 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	ARL14EP	Q8N8R7	260 aa	Predicted RBP	10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	ENGASE	Q8NFI3	743 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	DEPTOR	Q8TB45	409 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	IPO4	Q8TEX9	1081 aa	Known RBP	10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	MRGPRX1	Q96LB2	322 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	CCDC43	Q96MW1	224 aa	Known RBP	10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	GPR174	Q9BXC1	333 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	C1QTNF2	Q9BXJ5	285 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	ZCWPW1	Q9H0M4	648 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	PTPRH	Q9HD43	1115 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	MAN2B2	Q9Y2E5	1009 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	SNX11	Q9Y5W9	270 aa		10.33	□□□□□ -0.76
PTPN20-223	ENST00000509900	PLXNA2	O75051	1894 aa		10.32	□□□□□ -0.76
PTPN20-223	ENST00000509900	ANO9	A1A5B4	782 aa		10.32	□□□□□ -0.76
PTPN20-223	ENST00000509900	C2orf78	A6NCI8	922 aa		10.32	□□□□□ -0.76
PTPN20-223	ENST00000509900	ENC1	O14682	589 aa		10.32	□□□□□ -0.76
PTPN20-223	ENST00000509900	C1S	P09871	688 aa		10.32	□□□□□ -0.76
PTPN20-223	ENST00000509900	NCAM1	P13591	858 aa		10.32	□□□□□ -0.76
PTPN20-223	ENST00000509900	POU3F2	P20265	443 aa	Predicted RBP	10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms