RNA–Protein interactions for RNA: ENST00000509355.5

PDE4D-217, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 847 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-217ENST00000509355 PAPD7Q5XG87 772 aaKnown RBP5.86□□□□□ -1.47
PDE4D-217ENST00000509355 USP45Q70EL2 814 aa5.86□□□□□ -1.47
PDE4D-217ENST00000509355 C1QL2Q7Z5L3 287 aa5.86□□□□□ -1.47
PDE4D-217ENST00000509355 MIER2Q8N344 545 aa5.86□□□□□ -1.47
PDE4D-217ENST00000509355 B3GALNT2Q8NCR0 500 aa5.86□□□□□ -1.47
PDE4D-217ENST00000509355 PSD4Q8NDX1 1056 aa5.86□□□□□ -1.47
PDE4D-217ENST00000509355 CNPPD1Q9BV87 410 aa5.86□□□□□ -1.47
PDE4D-217ENST00000509355 PCDH12Q9NPG4 1184 aa5.86□□□□□ -1.47
PDE4D-217ENST00000509355 UBR3Q6ZT12 1888 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 RNF123Q5XPI4 1314 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 USP42Q9H9J4 1324 aaKnown RBP5.85□□□□□ -1.47
PDE4D-217ENST00000509355 F5H697 171 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 TRIAP1O43715 76 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 SOAT2O75908 522 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 ZNF135P52742 658 aaPredicted RBP5.85□□□□□ -1.47
PDE4D-217ENST00000509355 EXOSC10Q01780 885 aaKnown RBP5.85□□□□□ -1.47
PDE4D-217ENST00000509355 TFF2Q03403 129 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 BOP1Q14137 746 aaKnown RBP5.85□□□□□ -1.47
PDE4D-217ENST00000509355 TSTD2Q5T7W7 516 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 SLC30A10Q6XR72 485 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 HASPINQ8TF76 798 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 COG3Q96JB2 828 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 ALG8Q9BVK2 526 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 WDCPQ9H6R7 721 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 TCF7L1Q9HCS4 588 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 SERTAD4Q9NUC0 356 aa5.85□□□□□ -1.47
PDE4D-217ENST00000509355 VIRMAQ69YN4 1812 aaKnown RBP5.84□□□□□ -1.47
PDE4D-217ENST00000509355 TAF1LQ8IZX4 1826 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 PDE4DIPQ5VU43 2346 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 DNAJC9-AS1A6NH13 148 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 GCOM1H8Y6P7 765 aaPredicted RBP5.84□□□□□ -1.47
PDE4D-217ENST00000509355 NPHP1O15259 732 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 KIF20AO95235 890 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 SERPINB2P05120 415 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 GNAI3P08754 354 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 SMARCA1P28370 1054 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 TM4SF1P30408 202 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 MAP2K6P52564 334 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 GNAI1P63096 354 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 THEMIS2Q5TEJ8 643 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 HEATR3Q7Z4Q2 680 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 CTU1Q7Z7A3 348 aaKnown RBP5.84□□□□□ -1.47
PDE4D-217ENST00000509355 PPP1R3BQ86XI6 285 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 ANKRD13AQ8IZ07 590 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 CPA6Q8N4T0 437 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 SMG7Q92540 1137 aaKnown RBP5.84□□□□□ -1.47
PDE4D-217ENST00000509355 TINAGL1Q9GZM7 467 aaPredicted RBP5.84□□□□□ -1.47
PDE4D-217ENST00000509355 ST3GAL5Q9UNP4 418 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 COL4A3BPQ9Y5P4 624 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 TIAM2Q8IVF5 1701 aa5.84□□□□□ -1.47
PDE4D-217ENST00000509355 TNRC18O15417 2968 aaPredicted RBP5.84□□□□□ -1.48
PDE4D-217ENST00000509355 URI1O94763 535 aaPredicted RBP5.83□□□□□ -1.48
PDE4D-217ENST00000509355 TYRP14679 529 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 JUPP14923 745 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 PHKA1P46020 1223 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 CRKLP46109 303 aaKnown RBP5.83□□□□□ -1.48
PDE4D-217ENST00000509355 FCRLBQ6BAA4 426 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 USP37Q86T82 979 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 RGMAQ96B86 450 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 HAPLN3Q96S86 360 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 POLR3GLQ9BT43 218 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 C1QTNF7Q9BXJ2 289 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 SERHLQ9NQF3 203 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 TERF2IPQ9NYB0 399 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 EHD3Q9NZN3 535 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 DKK3Q9UBP4 350 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 ABCF2Q9UG63 623 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 HDAC9Q9UKV0 1011 aa5.83□□□□□ -1.48
PDE4D-217ENST00000509355 BRCA1P38398 1863 aaKnown RBP5.83□□□□□ -1.48
PDE4D-217ENST00000509355 FAM208AQ9UK61 1670 aaKnown RBP5.82□□□□□ -1.48
PDE4D-217ENST00000509355 ZNF541Q9H0D2 1346 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 CELF2O95319 508 aaKnown RBP5.82□□□□□ -1.48
PDE4D-217ENST00000509355 PRKCGP05129 697 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 CELA2AP08217 269 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 DRD4P21917 467 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 CCND1P24385 295 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 NKX6-1P78426 367 aaPredicted RBP5.82□□□□□ -1.48
PDE4D-217ENST00000509355 PKN2Q16513 984 aaKnown RBP5.82□□□□□ -1.48
PDE4D-217ENST00000509355 RBM20Q5T481 1227 aaKnown RBP5.82□□□□□ -1.48
PDE4D-217ENST00000509355 EMC10Q5UCC4 262 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 VPS53Q5VIR6 699 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 CST9Q5W186 159 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 RASAL3Q86YV0 1011 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 FKBP10Q96AY3 582 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 ACTRT3Q9BYD9 372 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 SIK2Q9H0K1 926 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 WNT6Q9Y6F9 365 aa5.82□□□□□ -1.48
PDE4D-217ENST00000509355 SBF1O95248 1867 aa5.81□□□□□ -1.48
PDE4D-217ENST00000509355 LTN1O94822 1766 aa5.81□□□□□ -1.48
PDE4D-217ENST00000509355 ANKRD62A6NC57 917 aa5.81□□□□□ -1.48
PDE4D-217ENST00000509355 MANSC4A6NHS7 340 aaPredicted RBP5.81□□□□□ -1.48
PDE4D-217ENST00000509355 LATS1O95835 1130 aa5.81□□□□□ -1.48
PDE4D-217ENST00000509355 TTLL1O95922 423 aa5.81□□□□□ -1.48
PDE4D-217ENST00000509355 NR2F6P10588 404 aa5.81□□□□□ -1.48
PDE4D-217ENST00000509355 GCLCP48506 637 aaPredicted RBP5.81□□□□□ -1.48
PDE4D-217ENST00000509355 SSBP2P81877 361 aaPredicted RBP5.81□□□□□ -1.48
PDE4D-217ENST00000509355 BMPR2Q13873 1038 aa5.81□□□□□ -1.48
PDE4D-217ENST00000509355 RRS1Q15050 365 aaKnown RBP5.81□□□□□ -1.48
PDE4D-217ENST00000509355 BRDTQ58F21 947 aaPredicted RBP5.81□□□□□ -1.48
PDE4D-217ENST00000509355 AMIGO2Q86SJ2 522 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms