RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 SEMA3GQ9NS98 782 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 TBC1D14Q9P2M4 693 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 SRRDQ9UH36 339 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CYP8B1Q9UNU6 501 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 FCF1Q9Y324 198 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 PCDHA3Q9Y5H8 950 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 ZFP37Q9Y6Q3 630 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 COL11A2P13942 1736 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 MACROD2A1Z1Q3 448 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 C2orf71A6NGG8 1288 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 FAM25EA8MYX2 175 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 AP3B1O00203 1094 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 RPS6KA4O75676 772 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 IDH1O75874 414 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 ABLIM3O94929 683 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 ZBED1O96006 694 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 ENO1P06733 434 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CLTAP09496 248 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 SCG2P13521 617 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 PDCP20941 246 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 TARSP26639 723 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 LIMK1P53667 647 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 MRPS15P82914 257 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 PLAURQ03405 335 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 PPARAQ07869 468 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 RAPSNQ13702 412 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 PRKD1Q15139 912 aaPredicted RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 ACAD10Q6JQN1 1059 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 LILRA6Q6PI73 481 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 UBE2J2Q8N2K1 259 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 FBXL16Q8N461 479 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CCHCR1Q8TD31 782 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 CCDC74BQ96LY2 380 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 SH3GL2Q99962 352 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 VTA1Q9NP79 307 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 PIH1D1Q9NWS0 290 aaKnown RBP4.09□□□□□ -1.75
NEDD4-209ENST00000508871 WBP1LQ9NX94 342 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 SAGE1Q9NXZ1 904 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 SCOCQ9UIL1 159 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 MAN2B2Q9Y2E5 1009 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 PCDHB12Q9Y5F1 795 aa4.09□□□□□ -1.75
NEDD4-209ENST00000508871 A8MUI8 341 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 PLK4O00444 970 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 SEPT4O43236 478 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 SGTAO43765 313 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 COQ9O75208 318 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 ALAS2P22557 587 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 PIK3CBP42338 1070 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 EPHB3P54753 998 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 MFAP4P55083 255 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 MRPS25P82663 173 aaKnown RBP4.09□□□□□ -1.76
NEDD4-209ENST00000508871 ROR1Q01973 937 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 RPA4Q13156 261 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 RPS6KA1Q15418 735 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 NR0B2Q15466 257 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 PREPLQ4J6C6 727 aaPredicted RBP4.09□□□□□ -1.76
NEDD4-209ENST00000508871 CFAP157Q5JU67 520 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 CYP26C1Q6V0L0 522 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF227Q86WZ6 799 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 C16orf71Q8IYS4 520 aaPredicted RBP4.09□□□□□ -1.76
NEDD4-209ENST00000508871 NECAB1Q8N987 351 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 CCNYQ8ND76 341 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 OR52K2Q8NGK3 314 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 CATSPER2Q96P56 530 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 TUBGCP2Q9BSJ2 902 aa4.09□□□□□ -1.76
NEDD4-209ENST00000508871 HEYLQ9NQ87 328 aaPredicted RBP4.09□□□□□ -1.76
NEDD4-209ENST00000508871 EPN1Q9Y6I3 576 aaPredicted RBP4.09□□□□□ -1.76
NEDD4-209ENST00000508871 E9PBE3 544 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 NPPAP01160 153 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 A1BGP04217 495 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 TROVE2P10155 538 aaKnown RBP eCLIP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 CASTP20810 708 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 LIFRP42702 1097 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ASMTP46597 345 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 STAT2P52630 851 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 RPL6Q02878 288 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 HS1BP3Q53T59 392 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 DEPDC1Q5TB30 811 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 NFXL1Q6ZNB6 911 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ESPNLQ6ZVH7 1005 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ILDR1Q86SU0 546 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 BBS5Q8N3I7 341 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 FSTL5Q8N475 847 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF784Q8NCA9 323 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 C1orf162Q8NEQ5 155 aaPredicted RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 OMA1Q96E52 524 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 DDX50Q9BQ39 737 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 MROH8Q9H579 483 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 PDE11AQ9HCR9 933 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 SERPINB13Q9UIV8 391 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 CNPY2Q9Y2B0 182 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 C19orf81C9J6K1 198 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 TLR2O60603 784 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 NTSR2O95665 410 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 RB1P06400 928 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 BFSP2Q13515 415 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 ZMYM1Q5SVZ6 1142 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 CAPRIN2Q6IMN6 1127 aaKnown RBP4.08□□□□□ -1.76
NEDD4-209ENST00000508871 MICALCLQ6ZW33 695 aa4.08□□□□□ -1.76
NEDD4-209ENST00000508871 RAB44Q7Z6P3 723 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms