RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SRGNP10124 158 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 GATA3P23771 443 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ARHGAP25P42331 645 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ABCG1P45844 678 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 LMAN1P49257 510 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 MRPL12P52815 198 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 FPGSQ05932 587 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 KLF1Q13351 362 aaPredicted RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 PLCB4Q15147 1175 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 PPP2R5AQ15172 486 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 CLUL1Q15846 466 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 CD300EQ496F6 205 aaPredicted RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ARHGAP29Q52LW3 1261 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 RNF219Q5W0B1 726 aaPredicted RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 KAZNQ674X7 775 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 KIAA0895LQ68EN5 471 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ZNF788Q6ZQV5 615 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 TSHZ1Q6ZSZ6 1077 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 MICALCLQ6ZW33 695 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 GRASPQ7Z6J2 395 aaPredicted RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 CLNKQ7Z7G1 428 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 PLA2G4DQ86XP0 818 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 TCP11L2Q8N4U5 519 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 SH2D3CQ8N5H7 860 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 NEK11Q8NG66 645 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ATL2Q8NHH9 583 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 TDRD7Q8NHU6 1098 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 SLC30A5Q8TAD4 765 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 FAM71BQ8TC56 605 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 LPIN2Q92539 896 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ARHGAP45Q92619 1136 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 CABS1Q96KC9 395 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 MPHOSPH8Q99549 860 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 THUMPD2Q9BTF0 503 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 STK31Q9BXU1 1019 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 TRIM5Q9C035 493 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 NAT10Q9H0A0 1025 aaKnown RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ZSCAN16Q9H4T2 348 aaPredicted RBP5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 CPNE5Q9HCH3 593 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 INTS13Q9NVM9 706 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 RNF7Q9UBF6 113 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 ADAM21Q9UKJ8 722 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 PCDHA13Q9Y5I0 950 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.08□□□□□ -1.63e-6■□□□□ 10.3
PDLIM5-211ENST00000508531 NRAPQ86VF7 1730 aa5.08□□□□□ -1.6
PDLIM5-211ENST00000508531 SBNO1A3KN83 1393 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 KIAA0232Q92628 1395 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 MAP3K5Q99683 1374 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 SHTN1A0MZ66 631 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 DNAJC9-AS1A6NH13 148 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 EBAG9O00559 213 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 ERC2O15083 957 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 MPPED1O15442 326 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 ORC4O43929 436 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 EZRP15311 586 aaKnown RBP5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 KCNA2P16389 499 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 PDCP20941 246 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 ELF1P32519 619 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 ZNF75DP51815 510 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 SLC8A3P57103 927 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 RPS7P62081 194 aaKnown RBP5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 MTA1Q13330 715 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 BIRC2Q13490 618 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 PABPC1LQ4VXU2 614 aaKnown RBP5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 CCDC38Q502W7 563 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 TSTD2Q5T7W7 516 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 B4GALNT4Q76KP1 1039 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 MIGA2Q7L4E1 593 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 LUZP1Q86V48 1076 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 ITPRIPQ8IWB1 547 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 LRRC8AQ8IWT6 810 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 NSUN7Q8NE18 718 aaKnown RBP5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 TOR1AIP2Q8NFQ8 470 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 GTF3C6Q969F1 213 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 SMARCE1Q969G3 411 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 FUCA2Q9BTY2 467 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 ZBTB40Q9NUA8 1239 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 TDP1Q9NUW8 608 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 ETAA1Q9NY74 926 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 CTTNBP2NLQ9P2B4 639 aa5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 ORC3Q9UBD5 711 aaPredicted RBP5.07□□□□□ -1.6
PDLIM5-211ENST00000508531 GOLGA6L4A6NEF3 574 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 GOLGA6L10A6NI86 522 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 CGB1A6NKQ9 187 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 K7ESF4 209 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 PROM1O43490 865 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 TOMM70O94826 608 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 KIAA0754O94854 1291 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 CHRM2P08172 466 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 VIL1P09327 827 aaKnown RBP5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 MTHFD1P11586 935 aaKnown RBP5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 SKILP12757 684 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 SLC8A1P32418 973 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 GRIA3P42263 894 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 WASP42768 502 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 ZNF280AP59817 542 aaPredicted RBP5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 SRSF4Q08170 494 aaKnown RBP5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 ZNF844Q08AG5 666 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 IFFO1Q0D2I5 559 aa5.06□□□□□ -1.6
PDLIM5-211ENST00000508531 DRP2Q13474 957 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms