RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 SASS6Q6UVJ0 657 aa15.9■□□□□ 0.14
TRIO-211ENST00000508343 GBP6Q6ZN66 633 aa15.9■□□□□ 0.14
TRIO-211ENST00000508343 GPRIN1Q7Z2K8 1008 aa15.9■□□□□ 0.14
TRIO-211ENST00000508343 ARHGEF19Q8IW93 802 aa15.9■□□□□ 0.14
TRIO-211ENST00000508343 TTC16Q8NEE8 873 aa15.9■□□□□ 0.14
TRIO-211ENST00000508343 TTC8Q8TAM2 541 aa15.9■□□□□ 0.14
TRIO-211ENST00000508343 FAM3CQ92520 227 aa15.9■□□□□ 0.14
TRIO-211ENST00000508343 CRACR2AQ9BSW2 395 aa15.9■□□□□ 0.14
TRIO-211ENST00000508343 TLR8Q9NR97 1041 aaKnown RBP15.9■□□□□ 0.14
TRIO-211ENST00000508343 GTPBP10A4D1E9 387 aaKnown RBP15.89■□□□□ 0.13
TRIO-211ENST00000508343 RNF225M0QZC1 329 aaPredicted RBP15.89■□□□□ 0.13
TRIO-211ENST00000508343 LEFTY2O00292 366 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 TARSP26639 723 aaKnown RBP15.89■□□□□ 0.13
TRIO-211ENST00000508343 KIF11P52732 1056 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 ZXDBP98169 803 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 USP4Q13107 963 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 RUNX3Q13761 415 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 MAN2A1Q16706 1144 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 GOLGA7BQ2TAP0 167 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 CCDC183Q5T5S1 534 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 TRIM68Q6AZZ1 485 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 RALGPS2Q86X27 583 aaPredicted RBP15.89■□□□□ 0.13
TRIO-211ENST00000508343 KIAA1958Q8N8K9 716 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 ENOX1Q8TC92 643 aaKnown RBP15.89■□□□□ 0.13
TRIO-211ENST00000508343 OSCP1Q8WVF1 389 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 CLDN23Q96B33 292 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 FAM81BQ96LP2 452 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 KREMEN1Q96MU8 473 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 IRF2BPLQ9H1B7 796 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 EBF3Q9H4W6 596 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 UBE2TQ9NPD8 197 aaPredicted RBP15.89■□□□□ 0.13
TRIO-211ENST00000508343 HPS4Q9NQG7 708 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 DUS2Q9NX74 493 aaKnown RBP15.89■□□□□ 0.13
TRIO-211ENST00000508343 HESX1Q9UBX0 185 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 TSPAN16Q9UKR8 245 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 CPQQ9Y646 472 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 USP3Q9Y6I4 520 aa15.89■□□□□ 0.13
TRIO-211ENST00000508343 TICRRQ7Z2Z1 1910 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 SPECC1L-ADORA2AF8WAN1 911 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 COCHO43405 550 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 MBL2P11226 248 aaPredicted RBP15.88■□□□□ 0.13
TRIO-211ENST00000508343 SLC9A1P19634 815 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 MAGEA9P43362 315 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 SOX9P48436 509 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 PGFP49763 221 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 FZD5Q13467 585 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 CNGA2Q16280 664 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 EXOC3L4Q17RC7 722 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 VWA3BQ502W6 1294 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 ENOSF1Q7L5Y1 443 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 PIGZQ86VD9 579 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 TTC30AQ86WT1 665 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 ZNF687Q8N1G0 1237 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 TUBGCP2Q9BSJ2 902 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 CCSER2Q9H7U1 834 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 SAMSN1Q9NSI8 373 aaKnown RBP15.88■□□□□ 0.13
TRIO-211ENST00000508343 ANO10Q9NW15 660 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 SMPD4Q9NXE4 827 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 NDRG2Q9UN36 371 aaKnown RBP15.88■□□□□ 0.13
TRIO-211ENST00000508343 COL4A3Q01955 1670 aa15.88■□□□□ 0.13
TRIO-211ENST00000508343 O00370 1275 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 CYP26A1O43174 497 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 PRKCSHP14314 528 aaPredicted RBP15.87■□□□□ 0.13
TRIO-211ENST00000508343 ARSAP15289 507 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 CTHP32929 405 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 IFNAR2P48551 515 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 ZNF132P52740 706 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 BCAT1P54687 386 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 MFAP3P55082 362 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 AMPD2Q01433 879 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 PDE4CQ08493 712 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 STILQ15468 1287 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 HSP90AA4PQ58FG1 418 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 RAB41Q5JT25 222 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 TRIM65Q6PJ69 517 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 LCLAT1Q6UWP7 414 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 CCDC186Q7Z3E2 898 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 DDX42Q86XP3 938 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRIO-211ENST00000508343 RBBP8NLQ8NC74 664 aaPredicted RBP15.87■□□□□ 0.13
TRIO-211ENST00000508343 TFAP2BQ92481 460 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 FAM122AQ96E09 287 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 NACA2Q9H009 215 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 LINC00597Q9H2U6 94 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 NDST4Q9H3R1 872 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 CNTN6Q9UQ52 1028 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 NFE2L3Q9Y4A8 694 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 WNT6Q9Y6F9 365 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 COL4A2P08572 1712 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 CACNA1HO95180 2353 aa15.87■□□□□ 0.13
TRIO-211ENST00000508343 A0A1W2PQH9 124 aa15.86■□□□□ 0.13
TRIO-211ENST00000508343 OTOL1A6NHN0 477 aaPredicted RBP15.86■□□□□ 0.13
TRIO-211ENST00000508343 KCNJ18B7U540 433 aa15.86■□□□□ 0.13
TRIO-211ENST00000508343 H0Y858 1186 aa15.86■□□□□ 0.13
TRIO-211ENST00000508343 XPO1O14980 1071 aaKnown RBP15.86■□□□□ 0.13
TRIO-211ENST00000508343 TLR5O60602 858 aa15.86■□□□□ 0.13
TRIO-211ENST00000508343 EEF1GP26641 437 aaKnown RBP15.86■□□□□ 0.13
TRIO-211ENST00000508343 PON1P27169 355 aa15.86■□□□□ 0.13
TRIO-211ENST00000508343 ATP5C1P36542 298 aaKnown RBP15.86■□□□□ 0.13
TRIO-211ENST00000508343 RPS9P46781 194 aaKnown RBP15.86■□□□□ 0.13
TRIO-211ENST00000508343 PSEN1P49768 467 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms