RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 HPS4Q9NQG7 708 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 LMBRD1Q9NUN5 540 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 RWDD2AQ9UIY3 292 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 ARHGAP26Q9UNA1 814 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 COQ4Q9Y3A0 265 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 PCDHB4Q9Y5E5 795 aa9.92□□□□□ -0.82
DDX41-209ENST00000508279 OTOL1A6NHN0 477 aaPredicted RBP9.91□□□□□ -0.82
DDX41-209ENST00000508279 COCHO43405 550 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 OAS1P00973 400 aaKnown RBP9.91□□□□□ -0.82
DDX41-209ENST00000508279 CALCAP01258 141 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 TBXAS1P24557 533 aaPredicted RBP9.91□□□□□ -0.82
DDX41-209ENST00000508279 MTIF2P46199 727 aaKnown RBP9.91□□□□□ -0.82
DDX41-209ENST00000508279 SLC8A3P57103 927 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 MCCD1P59942 119 aaPredicted RBP9.91□□□□□ -0.82
DDX41-209ENST00000508279 ZXDBP98169 803 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 CSTF1Q05048 431 aaKnown RBP9.91□□□□□ -0.82
DDX41-209ENST00000508279 PDGFRLQ15198 375 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 GOLGA7BQ2TAP0 167 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 DPCR1Q3MIW9 517 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 SGO2Q562F6 1265 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 TSSK4Q6SA08 328 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 RALGPS2Q86X27 583 aaPredicted RBP9.91□□□□□ -0.82
DDX41-209ENST00000508279 ARHGEF19Q8IW93 802 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 TRIM59Q8IWR1 403 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 CPA6Q8N4T0 437 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 MLKLQ8NB16 471 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 OSCP1Q8WVF1 389 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 OVCA2Q8WZ82 227 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 KAT5Q92993 513 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 ATP2A3Q93084 1043 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 MSANTD3Q96H12 275 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 CRACR2AQ9BSW2 395 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 DUSP16Q9BY84 665 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 ECT2Q9H8V3 914 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 CSNK1G1Q9HCP0 422 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 TLR8Q9NR97 1041 aaKnown RBP9.91□□□□□ -0.82
DDX41-209ENST00000508279 CFAP97Q9P2B7 532 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 NUDT5Q9UKK9 219 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 SH3BP1Q9Y3L3 701 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 R4GN57 208 aa9.91□□□□□ -0.82
DDX41-209ENST00000508279 CACNA1HO95180 2353 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 A0A1W2PQH9 124 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 HHLA1C9JL84 531 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 PES1O00541 588 aaKnown RBP9.9□□□□□ -0.82
DDX41-209ENST00000508279 MDM4O15151 490 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 TLR5O60602 858 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 TBX18O95935 607 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 SP9P0CG40 484 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 CHRNB1P11230 501 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 KRT5P13647 590 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 PFKLP17858 780 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 MAGEA9P43362 315 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 PGFP49763 221 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 SLC7A9P82251 487 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 MTAPQ13126 283 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 NR1H3Q13133 447 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 FZD5Q13467 585 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 LRRC32Q14392 662 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 EML3Q32P44 896 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 NAIF1Q69YI7 327 aaPredicted RBP9.9□□□□□ -0.82
DDX41-209ENST00000508279 C1orf228Q6PIY5 440 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 Q6ZS52 159 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 EHBP1Q8NDI1 1231 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 UBA3Q8TBC4 463 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 CLDN23Q96B33 292 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 FAXDC2Q96IV6 333 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 INTS2Q9H0H0 1204 aaKnown RBP9.9□□□□□ -0.82
DDX41-209ENST00000508279 COMMD8Q9NX08 183 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 HESX1Q9UBX0 185 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 DACH1Q9UI36 760 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 NAGPAQ9UK23 515 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 TSPAN16Q9UKR8 245 aa9.9□□□□□ -0.82
DDX41-209ENST00000508279 FANCMQ8IYD8 2048 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 TULP2O00295 520 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 PIK3R2O00459 728 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 P4HA2O15460 535 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 NFATC1O95644 943 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 VDRP11473 427 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 RARGP13631 454 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 BRD2P25440 801 aaKnown RBP9.89□□□□□ -0.83
DDX41-209ENST00000508279 GJA4P35212 333 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 USP8P40818 1118 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 RPS9P46781 194 aaKnown RBP9.89□□□□□ -0.83
DDX41-209ENST00000508279 GALK1P51570 392 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 AMPD2Q01433 879 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 GRSF1Q12849 480 aaKnown RBP eCLIP9.89□□□□□ -0.83
DDX41-209ENST00000508279 C10orf120Q5SQS8 335 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 FOXR2Q6PJQ5 311 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 CLEC17AQ6ZS10 378 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 PIGZQ86VD9 579 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 TTC30AQ86WT1 665 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 DDX42Q86XP3 938 aaKnown RBP eCLIP9.89□□□□□ -0.83
DDX41-209ENST00000508279 ANKRD52Q8NB46 1076 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 RBBP8NLQ8NC74 664 aaPredicted RBP9.89□□□□□ -0.83
DDX41-209ENST00000508279 GPT2Q8TD30 523 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 NDRG1Q92597 394 aaKnown RBP9.89□□□□□ -0.83
DDX41-209ENST00000508279 CHFRQ96EP1 664 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 MED15Q96RN5 788 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 CHRDQ9H2X0 955 aa9.89□□□□□ -0.83
DDX41-209ENST00000508279 NMUR1Q9HB89 426 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms