RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FSHBP01225 129 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 NPPBP16860 134 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 ZEB1P37275 1124 aaPredicted RBP4.07□□□□□ -1.76
LSM6-205ENST00000507449 LIPAP38571 399 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 RGS19P49795 217 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 CLCN2P51788 898 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 PGDP52209 483 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 PNLIPRP1P54315 467 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 NSUN2Q08J23 767 aaKnown RBP eCLIP4.07□□□□□ -1.76
LSM6-205ENST00000507449 FOXO1Q12778 655 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 GRM1Q13255 1194 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 ARL6IP4Q66PJ3 421 aaKnown RBP4.07□□□□□ -1.76
LSM6-205ENST00000507449 MZT2AQ6P582 158 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 IZUMO1Q8IYV9 350 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 METTL25Q8N6Q8 603 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 SLC16A11Q8NCK7 471 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 B3GALNT2Q8NCR0 500 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 PROKR1Q8TCW9 393 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 OSCP1Q8WVF1 389 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 HAS1Q92839 578 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 GLG1Q92896 1179 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 EID2BQ96D98 161 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 Q96MF0 132 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 HAPLN3Q96S86 360 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 KATNAL1Q9BW62 490 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 SORBS1Q9BX66 1292 aaKnown RBP4.07□□□□□ -1.76
LSM6-205ENST00000507449 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.07□□□□□ -1.76
LSM6-205ENST00000507449 WDR11Q9BZH6 1224 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 MYLK2Q9H1R3 596 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 SERHL2Q9H4I8 314 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 FSCN3Q9NQT6 498 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 TBCCD1Q9NVR7 557 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 KCTD5Q9NXV2 234 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 DGKBQ9Y6T7 804 aa4.07□□□□□ -1.76
LSM6-205ENST00000507449 COL15A1P39059 1388 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 A1L4Q6 167 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 IPO5O00410 1097 aaKnown RBP4.06□□□□□ -1.76
LSM6-205ENST00000507449 NTSR2O95665 410 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 IL6RP08887 468 aaPredicted RBP4.06□□□□□ -1.76
LSM6-205ENST00000507449 IDEP14735 1019 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 PTGS2P35354 604 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 GATMP50440 423 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 TIRAPP58753 221 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 ITIH3Q06033 890 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 GPS1Q13098 491 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 ATP1A4Q13733 1029 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 POSTNQ15063 836 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 TXNRD1Q16881 649 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 KIAA0895LQ68EN5 471 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 TANGO2Q6ICL3 276 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 KCNV1Q6PIU1 500 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 SYNE4Q8N205 404 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 TOR1AIP2Q8NFQ8 470 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 MBD3L2Q8NHZ7 208 aaPredicted RBP4.06□□□□□ -1.76
LSM6-205ENST00000507449 TRAPPC12Q8WVT3 735 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 SOCS4Q8WXH5 440 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 CCT6BQ92526 530 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 RFKQ969G6 155 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 TBC1D20Q96BZ9 403 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 WDYHV1Q96HA8 205 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 ZNF668Q96K58 619 aaPredicted RBP4.06□□□□□ -1.76
LSM6-205ENST00000507449 HIST1H2AAQ96QV6 131 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 WDR24Q96S15 920 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 PRPF18Q99633 342 aaKnown RBP4.06□□□□□ -1.76
LSM6-205ENST00000507449 ISCA1Q9BUE6 129 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 VN1R3Q9BXE9 311 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 MLXIPQ9HAP2 919 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 CASS4Q9NQ75 786 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 SYBUQ9NX95 663 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 SAGE1Q9NXZ1 904 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 LPAR3Q9UBY5 353 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 DRG1Q9Y295 367 aaKnown RBP4.06□□□□□ -1.76
LSM6-205ENST00000507449 SLC27A6Q9Y2P4 619 aa4.06□□□□□ -1.76
LSM6-205ENST00000507449 FER1L4A9Z1Z3 1794 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 CCDC189A1A4V9 331 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 YY2O15391 372 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 USP1O94782 785 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 GLP2RO95838 553 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 FGAP02671 866 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 FESP07332 822 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 CHRM2P08172 466 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 GYS1P13807 737 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 KLRK1P26718 216 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 ITPKBP27987 946 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 RBL1P28749 1068 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 EPHA3P29320 983 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 PRKAR1BP31321 381 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 GDF5P43026 501 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 RENBPP51606 427 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 NXPH1P58417 271 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 MTAPQ13126 283 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 RAPGEF1Q13905 1077 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 TBCCQ15814 346 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 TREML2Q5T2D2 321 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 ABHD17BQ5VST6 288 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 SULT6B1Q6IMI4 303 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 CLEC9AQ6UXN8 241 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 DPY19L3Q6ZPD9 716 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 C11orf44Q8N8P7 122 aa4.05□□□□□ -1.76
LSM6-205ENST00000507449 SPATA5Q8NB90 893 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms