RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 FAM163BP0C2L3 166 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 GAP43P17677 238 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 GRIK1P39086 918 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 CASP5P51878 434 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 PSMC1P62191 440 aaKnown RBP17.53■□□□□ 0.4
SNF8-205ENST00000507302 MYO1EQ12965 1108 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 SNX30Q5VWJ9 437 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 TTC30AQ86WT1 665 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 SLC41A1Q8IVJ1 513 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 MINDY1Q8N5J2 469 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 ADAMTS14Q8WXS8 1223 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 HPDLQ96IR7 371 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 CBWD1Q9BRT8 395 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 MRPL44Q9H9J2 332 aaKnown RBP17.53■□□□□ 0.4
SNF8-205ENST00000507302 FSCN3Q9NQT6 498 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 BCCIPQ9P287 314 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNF8-205ENST00000507302 CFAP97Q9P2B7 532 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 STK17AQ9UEE5 414 aa17.53■□□□□ 0.4
SNF8-205ENST00000507302 IGHV1OR15-9A0A0B4J2B8 117 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 A0A1W2PQD8 194 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 F8VP50 259 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 CFIP05156 583 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 RDXP35241 583 aaKnown RBP17.52■□□□□ 0.4
SNF8-205ENST00000507302 RPL6Q02878 288 aaKnown RBP17.52■□□□□ 0.4
SNF8-205ENST00000507302 ZNF33AQ06730 810 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 TAF10Q12962 218 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 ALCAMQ13740 583 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 SOWAHCQ53LP3 525 aaPredicted RBP17.52■□□□□ 0.4
SNF8-205ENST00000507302 LY6G5CQ5SRR4 150 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 USP49Q70CQ1 688 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 DYMQ7RTS9 669 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 TRMT11Q7Z4G4 463 aaKnown RBP17.52■□□□□ 0.4
SNF8-205ENST00000507302 OR5B17Q8NGF7 314 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 OVCA2Q8WZ82 227 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 ZNF419Q96HQ0 510 aaPredicted RBP17.52■□□□□ 0.4
SNF8-205ENST00000507302 ZDHHC4Q9NPG8 344 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 IL37Q9NZH6 218 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 PCDHB13Q9Y5F0 798 aa17.52■□□□□ 0.4
SNF8-205ENST00000507302 ACACAQ13085 2346 aa17.52■□□□□ 0.39
SNF8-205ENST00000507302 KIAA0391O15091 583 aaKnown RBP17.51■□□□□ 0.39
SNF8-205ENST00000507302 TACC1O75410 805 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 APC2O95996 2303 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 KRT19P08727 400 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 TMEM191BP0C7N4 346 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 ANXA13P27216 316 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 ATXN3P54252 364 aaPredicted RBP17.51■□□□□ 0.39
SNF8-205ENST00000507302 CACNA2D1P54289 1103 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 GAD2Q05329 585 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 CCNI2Q6ZMN8 369 aaPredicted RBP17.51■□□□□ 0.39
SNF8-205ENST00000507302 GLRX5Q86SX6 157 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 ZNF513Q8N8E2 541 aaPredicted RBP17.51■□□□□ 0.39
SNF8-205ENST00000507302 TERB1Q8NA31 727 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 EPSTI1Q96J88 318 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 SMPD4Q9NXE4 827 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 CALCOCO1Q9P1Z2 691 aa17.51■□□□□ 0.39
SNF8-205ENST00000507302 HELZ2Q9BYK8 2649 aaKnown RBP17.5■□□□□ 0.39
SNF8-205ENST00000507302 FAM92AA1XBS5 289 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 GOLGA8IPA6NC78 632 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 GOLGA8JA6NMD2 632 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 ZNF217O75362 1048 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 TULP3O75386 442 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 CYP27A1Q02318 531 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 KDSRQ06136 332 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 SCAPQ12770 1279 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 PREPLQ4J6C6 727 aaPredicted RBP17.5■□□□□ 0.39
SNF8-205ENST00000507302 TDRD10Q5VZ19 366 aaKnown RBP17.5■□□□□ 0.39
SNF8-205ENST00000507302 MIB1Q86YT6 1006 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 GPD1LQ8N335 351 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 ANKRD36BP1Q96IX9 119 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 SLITRK1Q96PX8 696 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 GTPBP2Q9BX10 602 aaKnown RBP17.5■□□□□ 0.39
SNF8-205ENST00000507302 FGFBP2Q9BYJ0 223 aa17.5■□□□□ 0.39
SNF8-205ENST00000507302 SCAMP3O14828 347 aaKnown RBP17.49■□□□□ 0.39
SNF8-205ENST00000507302 COCHO43405 550 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 GREM1O60565 184 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 CBFA2T3O75081 653 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 GCNT3O95395 438 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 SYPP08247 313 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 PDGFRBP09619 1106 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 ZDHHC11BP0C7U3 371 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 GJB2P29033 226 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 NTSR1P30989 418 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 TUBP50607 506 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 SURF1Q15526 300 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 TRIP6Q15654 476 aaKnown RBP17.49■□□□□ 0.39
SNF8-205ENST00000507302 DUOXA2Q1HG44 320 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 PGBD3Q8N328 593 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 PDZD8Q8NEN9 1154 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 OR2I1PQ8NGU4 316 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 GABRG3Q99928 467 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 MRPL45Q9BRJ2 306 aaKnown RBP17.49■□□□□ 0.39
SNF8-205ENST00000507302 ELOVL4Q9GZR5 314 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 DEC1Q9P2X7 70 aa17.49■□□□□ 0.39
SNF8-205ENST00000507302 CIZ1Q9ULV3 898 aaPredicted RBP17.49■□□□□ 0.39
SNF8-205ENST00000507302 TBC1D3BA6NDS4 549 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 H3BQV1 296 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 SH3BP5O60239 455 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 MBL2P11226 248 aaPredicted RBP17.48■□□□□ 0.39
SNF8-205ENST00000507302 HOXB2P14652 356 aa17.48■□□□□ 0.39
SNF8-205ENST00000507302 SF3A1Q15459 793 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms