RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 SLC5A3P53794 718 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 CLDN10P78369 228 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 ELF2Q15723 593 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 PLA2G2CQ5R387 149 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 IL31Q6EBC2 164 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 PAQR9Q6ZVX9 377 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 ACOT1Q86TX2 421 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 C12orf40Q86WS4 652 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 DDX42Q86XP3 938 aaKnown RBP eCLIP12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 SLC9A9Q8IVB4 645 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 SFTPA1Q8IWL2 248 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 ADGRG2Q8IZP9 1017 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 CCDC33Q8N5R6 958 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 SCAMP5Q8TAC9 235 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 OVCA2Q8WZ82 227 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 SMARCD1Q96GM5 515 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 TNIP3Q96KP6 325 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 TPSD1Q9BZJ3 242 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 KCTD10Q9H3F6 313 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 DMAP1Q9NPF5 467 aaPredicted RBP12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 GMIPQ9P107 970 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 MMP17Q9ULZ9 603 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 INVSQ9Y283 1065 aa12.25□□□□□ -0.45
HMGCS1-204ENST00000507293 A0A1B0GVL5 298 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 TNFRSF10BO14763 440 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 AP1G2O75843 785 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 RHOBTB1O94844 696 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 ADH1CP00326 375 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 NR3C1P04150 777 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 ADH5P11766 374 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 CCDC130P13994 396 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 GBP1P32455 592 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 SLC6A11P48066 632 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 CREB5Q02930 508 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 KDSRQ06136 332 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 MESP2Q0VG99 397 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 ORC1Q13415 861 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 ZACNQ401N2 412 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 HECTD3Q5T447 861 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 CEP135Q66GS9 1140 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 ANO7Q6IWH7 933 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 RHBDF2Q6PJF5 856 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 RASSF3Q86WH2 238 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 ABCA7Q8IZY2 2146 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 FUKQ8N0W3 1084 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 CEP192Q8TEP8 1941 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 ZFRQ96KR1 1074 aaKnown RBP12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 PNKPQ96T60 521 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 CCSER2Q9H7U1 834 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 VPS45Q9NRW7 570 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 HMGXB4Q9UGU5 601 aa12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 CHORDC1Q9UHD1 332 aaPredicted RBP12.24□□□□□ -0.45
HMGCS1-204ENST00000507293 E2F8A0AVK6 867 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 PDXKO00764 312 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 KAT7O95251 611 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 KLF8O95600 359 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 APODP05090 189 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 CHRM1P11229 460 aaPredicted RBP12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 P4HA1P13674 534 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 HNRNPLP14866 589 aaKnown RBP eCLIP12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 BCKDHBP21953 392 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 EIF2DP41214 584 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 PIK3CAP42336 1068 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 NDST1P52848 882 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 MRPS21P82921 87 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 CRY1Q16526 586 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 SGSM1Q2NKQ1 1148 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 LY6G5CQ5SRR4 150 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 STPG1Q5TH74 334 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 SNX30Q5VWJ9 437 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 TCEAL6Q6IPX3 200 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 SPOPLQ6IQ16 392 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 SV2AQ7L0J3 742 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 TTC30AQ86WT1 665 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 ALLCQ8N6M5 410 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 ZMIZ2Q8NF64 920 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 MDGA1Q8NFP4 955 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 TMC2Q8TDI7 906 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 TMEM174Q8WUU8 243 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 DDX1Q92499 740 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 TCEAL3Q969E4 200 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 CHAMP1Q96JM3 812 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 CNOT6LQ96LI5 555 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 SMOQ99835 787 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 ARHGEF4Q9NR80 690 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 FAM49BQ9NUQ9 324 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 IL37Q9NZH6 218 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 TBC1D14Q9P2M4 693 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 USP25Q9UHP3 1055 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 SH3BP1Q9Y3L3 701 aa12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 MYO18AQ92614 2054 aaKnown RBP12.23□□□□□ -0.45
HMGCS1-204ENST00000507293 BCLAF3A2AJT9 711 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 CALUO43852 315 aaPredicted RBP12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 BEST1O76090 585 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 ASS1P00966 412 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 HLA-DRAP01903 254 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 RPN1P04843 607 aaKnown RBP12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 ZDHHC11BP0C7U3 371 aa12.22□□□□□ -0.45
HMGCS1-204ENST00000507293 PRR29P0C7W0 189 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms