RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, human

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-204	ENST00000507197	DUSP9	Q99956	384 aa	Known RBP	13.63	□□□□□ -0.23
SNHG4-204	ENST00000507197	LSM14B	Q9BX40	385 aa	Known RBP	13.63	□□□□□ -0.23
SNHG4-204	ENST00000507197	DNAI2	Q9GZS0	605 aa		13.63	□□□□□ -0.23
SNHG4-204	ENST00000507197	NACA2	Q9H009	215 aa		13.63	□□□□□ -0.23
SNHG4-204	ENST00000507197	EXOC1	Q9NV70	894 aa		13.63	□□□□□ -0.23
SNHG4-204	ENST00000507197	ANGPTL2	Q9UKU9	493 aa		13.63	□□□□□ -0.23
SNHG4-204	ENST00000507197	SH3BP1	Q9Y3L3	701 aa		13.63	□□□□□ -0.23
SNHG4-204	ENST00000507197	NME7	Q9Y5B8	376 aa		13.63	□□□□□ -0.23
SNHG4-204	ENST00000507197		A0A0A0MRY4	1105 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	CLDN5	O00501	218 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	KHNYN	O15037	678 aa	Known RBP	13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	DCLK1	O15075	740 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	MYL1	P05976	194 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	DPP6	P42658	865 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	TNFRSF4	P43489	277 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	SLC5A3	P53794	718 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	CACNA2D1	P54289	1103 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	RHBDF2	Q6PJF5	856 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	TRMT11	Q7Z4G4	463 aa	Known RBP	13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	SLC9A9	Q8IVB4	645 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	CCDC33	Q8N5R6	958 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	KCNV2	Q8TDN2	545 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	WHAMM	Q8TF30	809 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	KCNK16	Q96T55	309 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	EDEM2	Q9BV94	578 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	TPSD1	Q9BZJ3	242 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	GZF1	Q9H116	711 aa	Predicted RBP	13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	FBXO44	Q9H4M3	255 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	SMYD3	Q9H7B4	428 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	ARHGEF4	Q9NR80	690 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	USP25	Q9UHP3	1055 aa		13.62	□□□□□ -0.23
SNHG4-204	ENST00000507197	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	PDXK	O00764	312 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	IKBKB	O14920	756 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	COCH	O43405	550 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	AP1G2	O75843	785 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	KLF8	O95600	359 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	C4BPA	P04003	597 aa	Known RBP	13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	CASP1	P29466	404 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	TIE1	P35590	1138 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	CASP4	P49662	377 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	CDH8	P55286	799 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	GOLGA8F	Q08AF8	430 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	GOLGA8DP	Q0D2H9	430 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	GAB4	Q2WGN9	574 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	CYP2U1	Q7Z449	544 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	UNC93A	Q86WB7	457 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	TTC30A	Q86WT1	665 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	ALLC	Q8N6M5	410 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	IL17RC	Q8NAC3	791 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	TXNDC5	Q8NBS9	432 aa	Known RBP	13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	MDGA1	Q8NFP4	955 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	TMC2	Q8TDI7	906 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	CCDC47	Q96A33	483 aa	Known RBP	13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	IMPG2	Q9BZV3	1241 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	SMOC1	Q9H4F8	434 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	KRT82	Q9NSB4	513 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	RXFP3	Q9NSD7	469 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	TMEM30A	Q9NV96	361 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	DMAC2	Q9NW81	257 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	IL37	Q9NZH6	218 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	DEC1	Q9P2X7	70 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	FRMD4B	Q9Y2L6	1034 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	RALGAPA1	Q6GYQ0	2036 aa		13.61	□□□□□ -0.23
SNHG4-204	ENST00000507197	GREB1	Q4ZG55	1949 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	SPTBN2	O15020	2390 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	FAM92A	A1XBS5	289 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	TBC1D3B	A6NDS4	549 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	TNFRSF10B	O14763	440 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	ZBTB24	O43167	697 aa	Predicted RBP	13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	MAP3K13	O43283	966 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	KCNK5	O95279	499 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	ZDHHC11B	P0C7U3	371 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	SLC6A11	P48066	632 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	SHC2	P98077	582 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	STK4	Q13043	487 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	ST3GAL2	Q16842	350 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	SPDYC	Q5MJ68	293 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	LY6G5C	Q5SRR4	150 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	SCARA5	Q6ZMJ2	495 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	LPCAT2	Q7L5N7	544 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	CRYBG2	Q8N1P7	616 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	SCAMP5	Q8TAC9	235 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	PAGE5	Q96GU1	130 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	TLR8	Q9NR97	1041 aa	Known RBP	13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	SERTAD1	Q9UHV2	236 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	RCOR1	Q9UKL0	485 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	INVS	Q9Y283	1065 aa		13.6	□□□□□ -0.23
SNHG4-204	ENST00000507197	ANAPC1	Q9H1A4	1944 aa		13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	SCAMP3	O14828	347 aa	Known RBP	13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	HOXC11	O43248	304 aa	Predicted RBP	13.59	□□□□□ -0.23
SNHG4-204	ENST00000507197	CALU	O43852	315 aa	Predicted RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms