RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 SENP8Q96LD8 212 aa23.22■■□□□ 1.31
RNF4-207ENST00000506706 TBCBQ99426 244 aa23.22■■□□□ 1.31
RNF4-207ENST00000506706 ADAM7Q9H2U9 754 aa23.22■■□□□ 1.31
RNF4-207ENST00000506706 TPX2Q9ULW0 747 aaKnown RBP23.22■■□□□ 1.31
RNF4-207ENST00000506706 KIF3CO14782 793 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 PTPN1P18031 435 aaKnown RBP23.21■■□□□ 1.31
RNF4-207ENST00000506706 TKTP29401 623 aaKnown RBP23.21■■□□□ 1.31
RNF4-207ENST00000506706 CD52P31358 61 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 PTPN9P43378 593 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 TFDP2Q14188 446 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 DPYSL3Q14195 570 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 KRT81Q14533 505 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 LRRC31Q6UY01 552 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 AGMOQ6ZNB7 445 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 CLEC4CQ8WTT0 213 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 DDX23Q9BUQ8 820 aaKnown RBP23.21■■□□□ 1.31
RNF4-207ENST00000506706 DUSP16Q9BY84 665 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 ATP2C2O75185 946 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 TTC4O95801 387 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 IFNB1P01574 187 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 GHRP10912 638 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 RAB27AP51159 221 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 CLCNKBP51801 687 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 AFF1P51825 1210 aaKnown RBP23.21■■□□□ 1.31
RNF4-207ENST00000506706 MAGOHP61326 146 aaKnown RBP23.21■■□□□ 1.31
RNF4-207ENST00000506706 MMRN1Q13201 1228 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 ZSCAN26Q16670 478 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 REM2Q8IYK8 340 aaPredicted RBP23.21■■□□□ 1.31
RNF4-207ENST00000506706 TMEM86AQ8N2M4 240 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 ZCCHC9Q8N567 271 aaKnown RBP23.21■■□□□ 1.31
RNF4-207ENST00000506706 TLCD1Q96CP7 247 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 DNAJC17Q9NVM6 304 aaKnown RBP23.21■■□□□ 1.31
RNF4-207ENST00000506706 CACNG4Q9UBN1 327 aa23.21■■□□□ 1.31
RNF4-207ENST00000506706 TLDC2A0PJX2 215 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 EIF3HO15372 352 aaKnown RBP eCLIP23.2■■□□□ 1.3
RNF4-207ENST00000506706 ACSL3O95573 720 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 ACAT1P24752 427 aaKnown RBP23.2■■□□□ 1.3
RNF4-207ENST00000506706 SCNN1GP51170 649 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 PTK7Q13308 1070 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 TTC19Q6DKK2 380 aaPredicted RBP23.2■■□□□ 1.3
RNF4-207ENST00000506706 RELL1Q8IUW5 271 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 FUKQ8N0W3 1084 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 OSBPL7Q9BZF2 842 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 ROPN1BQ9BZX4 212 aaPredicted RBP23.2■■□□□ 1.3
RNF4-207ENST00000506706 ROPN1Q9HAT0 212 aaPredicted RBP23.2■■□□□ 1.3
RNF4-207ENST00000506706 NOD1Q9Y239 953 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 MCF2LO15068 1137 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 ZNF623O75123 536 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 IGFBP6P24592 240 aaPredicted RBP23.2■■□□□ 1.3
RNF4-207ENST00000506706 RPL9P32969 192 aaKnown RBP23.2■■□□□ 1.3
RNF4-207ENST00000506706 HDAC4P56524 1084 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 EIF3EP60228 445 aaKnown RBP23.2■■□□□ 1.3
RNF4-207ENST00000506706 PPP2R2AP63151 447 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 MORF4L2Q15014 288 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 RNF180Q86T96 592 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 RSAD2Q8WXG1 361 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 PWWP2AQ96N64 755 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 DDX43Q9NXZ2 648 aaKnown RBP23.2■■□□□ 1.3
RNF4-207ENST00000506706 SRRDQ9UH36 339 aa23.2■■□□□ 1.3
RNF4-207ENST00000506706 RASGRF2O14827 1237 aa23.19■■□□□ 1.3
RNF4-207ENST00000506706 MDM4O15151 490 aa23.19■■□□□ 1.3
RNF4-207ENST00000506706 RGS16O15492 202 aaPredicted RBP23.19■■□□□ 1.3
RNF4-207ENST00000506706 PECAM1P16284 738 aaPredicted RBP23.19■■□□□ 1.3
RNF4-207ENST00000506706 HOXD10P28358 340 aa23.19■■□□□ 1.3
RNF4-207ENST00000506706 LHX1P48742 406 aa23.19■■□□□ 1.3
RNF4-207ENST00000506706 ITGA7Q13683 1181 aa23.19■■□□□ 1.3
RNF4-207ENST00000506706 EFHC1Q5JVL4 640 aa23.19■■□□□ 1.3
RNF4-207ENST00000506706 PIGZQ86VD9 579 aa23.19■■□□□ 1.3
RNF4-207ENST00000506706 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.19■■□□□ 1.3
RNF4-207ENST00000506706 RNF157Q96PX1 679 aa23.19■■□□□ 1.3
RNF4-207ENST00000506706 SNRNP25Q9BV90 132 aaKnown RBP23.19■■□□□ 1.3
RNF4-207ENST00000506706 DDX20Q9UHI6 824 aaKnown RBP23.19■■□□□ 1.3
RNF4-207ENST00000506706 SMIM23A6NLE4 172 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 MGEA5O60502 916 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 CABYRO75952 493 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 NPR3P17342 541 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 MDH1P40925 334 aaKnown RBP23.18■■□□□ 1.3
RNF4-207ENST00000506706 DSC3Q14574 896 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 KYNUQ16719 465 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 DSTYKQ6XUX3 929 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 PCGF5Q86SE9 256 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 VSIG1Q86XK7 387 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 SPATA18Q8TC71 538 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 EPS8L3Q8TE67 593 aaKnown RBP23.18■■□□□ 1.3
RNF4-207ENST00000506706 CENPIQ92674 756 aaPredicted RBP23.18■■□□□ 1.3
RNF4-207ENST00000506706 RBM15Q96T37 977 aaKnown RBP eCLIP23.18■■□□□ 1.3
RNF4-207ENST00000506706 MED10Q9BTT4 135 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 C11orf84Q9BUA3 381 aaPredicted RBP23.18■■□□□ 1.3
RNF4-207ENST00000506706 NINJ2Q9NZG7 142 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 THSD7BQ9C0I4 1608 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 DCDC2CA8MYV0 355 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 CLDN5O00501 218 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 GUCY1A3Q02108 690 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 LPIN1Q14693 890 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 ZC3H12AQ5D1E8 599 aaKnown RBP23.18■■□□□ 1.3
RNF4-207ENST00000506706 MDH1BQ5I0G3 518 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 RNASEH2BQ5TBB1 312 aaKnown RBP23.18■■□□□ 1.3
RNF4-207ENST00000506706 P3H4Q92791 437 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 CAPNS2Q96L46 248 aa23.18■■□□□ 1.3
RNF4-207ENST00000506706 PCDH18Q9HCL0 1135 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms