RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 CPQQ9Y646 472 aa17.75■□□□□ 0.43
PDLIM7-215ENST00000506161 RALGAPA1Q6GYQ0 2036 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 FAM92AA1XBS5 289 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 CHURC1-FNTBB4DL54 471 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 TRDMT1O14717 391 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 COCHO43405 550 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 CILPO75339 1184 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 KRT13P13646 458 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 FNTBP49356 437 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 MAP3K7CLP57077 242 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 SLC7A9P82251 487 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 CLEC20AQ6ZU45 233 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 SPEM1Q8N4L4 309 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 FBXO32Q969P5 355 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 JAKMIP2Q96AA8 810 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 SMARCD1Q96GM5 515 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 TNIP3Q96KP6 325 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 TIGD1Q96MW7 591 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 GSDMAQ96QA5 445 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 NIF3L1Q9GZT8 377 aa17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 DMAP1Q9NPF5 467 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 CDV3Q9UKY7 258 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-215ENST00000506161 PRR5-ARHGAP8B1AHC4 643 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 ZDHHC11BP0C7U3 371 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 RPL13P26373 211 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 YWHAQP27348 245 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 OPRD1P41143 372 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 CXCL12P48061 93 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 ARHGAP8P85298 464 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 PDGFRLQ15198 375 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 ZNF394Q53GI3 561 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 FILIP1Q7Z7B0 1213 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 UNC93AQ86WB7 457 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 C12orf40Q86WS4 652 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 SMARCE1Q969G3 411 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 DUSP9Q99956 384 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 NMUR1Q9HB89 426 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 PCDHGA2Q9Y5H1 932 aa17.73■□□□□ 0.43
PDLIM7-215ENST00000506161 MYO18AQ92614 2054 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 HRO43593 1189 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 RNF40O75150 1001 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 CYP17A1P05093 508 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 CHRM1P11229 460 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 IFNAR2P48551 515 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 PXNP49023 591 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 MXI1P50539 228 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 CCR3P51677 355 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 LMNB2Q03252 620 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 ENPEPQ07075 957 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 LRRC32Q14392 662 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 LPAL2Q16609 132 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 DGKKQ5KSL6 1271 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 PPP1R26Q5T8A7 1209 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 KRT39Q6A163 491 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 HEATR6Q6AI08 1181 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 CC2D1AQ6P1N0 951 aaPredicted RBP17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 SECISBP2LQ93073 1101 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 EPC1Q9H2F5 836 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 CFAP97Q9P2B7 532 aa17.72■□□□□ 0.43
PDLIM7-215ENST00000506161 SPAG17Q6Q759 2223 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 GOLGA6L4A6NEF3 574 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 PPP1R3GB7ZBB8 358 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 CETN3O15182 167 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 TBX18O95935 607 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 MBL2P11226 248 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 DCAF17Q5H9S7 520 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 SLC35C1Q96A29 364 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 CYFIP2Q96F07 1278 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 SLITRK1Q96PX8 696 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 HNRNPABQ99729 332 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 P2RY13Q9BPV8 354 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 RTKNQ9BST9 563 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 IER2Q9BTL4 223 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 CYP3A43Q9HB55 503 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 RMND1Q9NWS8 449 aa17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 SMG5Q9UPR3 1016 aaKnown RBP17.71■□□□□ 0.43
PDLIM7-215ENST00000506161 ATP8B3O60423 1300 aa17.71■□□□□ 0.42
PDLIM7-215ENST00000506161 BIN1O00499 593 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 MDM4O15151 490 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 CYP26A1O43174 497 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 GREM1O60565 184 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 RTN3O95197 1032 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 PAPSS2O95340 614 aaPredicted RBP17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 EPB41P11171 864 aaKnown RBP17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 P4HA1P13674 534 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 TGM1P22735 817 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 GTF2H1P32780 548 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 SLC6A11P48066 632 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 RAD23BP54727 409 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 SNX30Q5VWJ9 437 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 TTI2Q6NXR4 508 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 C1orf228Q6PIY5 440 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 CPA6Q8N4T0 437 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 UBR7Q8N806 425 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 SLC4A11Q8NBS3 891 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 FBXL13Q8NEE6 735 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 ATRIPQ8WXE1 791 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 P2RY11Q96G91 374 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 NT5C1AQ9BXI3 368 aa17.7■□□□□ 0.42
PDLIM7-215ENST00000506161 PARD6AQ9NPB6 346 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms