RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 PCDHGB4Q9UN71 923 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 AKT3Q9Y243 479 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PRELID1Q9Y255 219 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TANC1Q9C0D5 1861 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ITIH6Q6UXX5 1313 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MROH5Q6ZUA9 1318 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 A0A096LPE4 126 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TRBV23-1A0A0A0MS06 115 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 A0A1W2PPZ6 126 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 A0A1W2PRQ8 180 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RNASEH2AO75792 299 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 POLR2CP19387 275 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ADCYAP1R1P41586 468 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 NCALDP61601 193 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GALNT2Q10471 571 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SMARCB1Q12824 385 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GRIK5Q16478 980 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RTN1Q16799 776 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PARP6Q2NL67 630 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SLC10A6Q3KNW5 377 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC152Q4G0S7 254 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PERM1Q5SV97 790 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 DACT2Q5SW24 774 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 FYB2Q5VWT5 728 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 DPY19L2P1Q6NXN4 242 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ZCCHC8Q6NZY4 707 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 OGFOD3Q6PK18 319 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 USP43Q70EL4 1123 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 NLRP9Q7RTR0 991 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 EXD1Q8NHP7 514 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 NPLOC4Q8TAT6 608 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PDXPQ96GD0 296 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 NR1H4Q96RI1 486 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 NTMT1Q9BV86 223 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 KRTAP17-1Q9BYP8 105 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 YIPF3Q9GZM5 350 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 POFUT1Q9H488 388 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CLEC1BQ9P126 229 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 AFG3L2Q9Y4W6 797 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHGA2Q9Y5H1 932 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHA13Q9Y5I0 950 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TRIM75PA6NK02 468 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TMEM114B3SHH9 223 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TMEM233B4DJY2 109 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TK2O00142 265 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 EYA2O00167 538 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 FOXN3O00409 490 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 IGF2BP3O00425 579 aaKnown RBP eCLIP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 VILLO15195 856 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 HDAC3O15379 428 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CTNND1O60716 968 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TAF5LO75529 589 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 KLRK1P26718 216 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ATP5DP30049 168 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MCAMP43121 646 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PEX3P56589 373 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 BNIP1Q12981 228 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ITGB3BPQ13352 177 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RAPGEF1Q13905 1077 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MAP7Q14244 749 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CYP27C1Q4G0S4 372 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GLE1Q53GS7 698 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TNNI3KQ59H18 835 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CDKAL1Q5VV42 579 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RESP18Q5W5W9 173 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF704Q6ZNC4 412 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 REC114Q7Z4M0 266 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 NANOGNBQ7Z5D8 188 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TMC3Q7Z5M5 1100 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 HID1Q8IV36 788 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ELMOD1Q8N336 334 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ARHGAP18Q8N392 663 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 C3orf58Q8NDZ4 430 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 LENG1Q96BZ8 264 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 FAM84BQ96KN1 310 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 WNT5BQ9H1J7 359 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SCPEP1Q9HB40 452 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PLCB1Q9NQ66 1216 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PANK4Q9NVE7 773 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 VPS18Q9P253 973 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 VWA7Q9Y334 891 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF451Q9Y4E5 1061 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RIPK3Q9Y572 518 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 FPGT-TNNI3KV9GXZ4 949 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RALGAPA2Q2PPJ7 1873 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ALPK3Q96L96 1907 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 LINC00854A0A1B0GVQ3 168 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ESYT2A0FGR8 921 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 E9PMD0 336 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 B3GALNT1O75752 331 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 URI1O94763 535 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PDE8BO95263 885 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 HTR3BO95264 441 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CYP17A1P05093 508 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CLTBP09497 229 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TMOD1P28289 359 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MSX1P28360 303 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 USP14P54578 494 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PLTPP55058 493 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 S100A12P80511 92 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms