RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 NT5C1AQ9BXI3 368 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 GOLPH3LQ9H4A5 285 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 MMRN2Q9H8L6 949 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 TMEM8AQ9HCN3 771 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 LMBRD1Q9NUN5 540 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 TBC1D14Q9P2M4 693 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 NME7Q9Y5B8 376 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 CPQQ9Y646 472 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 MYOFQ9NZM1 2061 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 CCDC163A0A0D9SF12 145 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 CHURC1-FNTBB4DL54 471 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 AKAP3O75969 853 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 OLFM2O95897 454 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 ADH1CP00326 375 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 OAS1P00973 400 aaKnown RBP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 GCLMP48507 274 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 FNTBP49356 437 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 TUBP50607 506 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 GALK1P51570 392 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 SLC5A3P53794 718 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 LMNB2Q03252 620 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 GOLGA8FQ08AF8 430 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 GOLGA8DPQ0D2H9 430 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 GAS6Q14393 721 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 PREPLQ4J6C6 727 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 WDR44Q5JSH3 913 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 HECTD3Q5T447 861 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 HEATR6Q6AI08 1181 aaKnown RBP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 FSTL4Q6MZW2 842 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 ERMP1Q7Z2K6 904 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 CAMKK1Q8N5S9 505 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 SMARCE1Q969G3 411 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 FAXDC2Q96IV6 333 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 KCNK16Q96T55 309 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 NIF3L1Q9GZT8 377 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 TLR8Q9NR97 1041 aaKnown RBP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 USP18Q9UMW8 372 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 SH3BP1Q9Y3L3 701 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 ZNF292O60281 2723 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 KIAA1549LQ6ZVL6 1849 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 OTOL1A6NHN0 477 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 PRR5-ARHGAP8B1AHC4 643 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 K7ESF4 209 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 FOXD2O60548 495 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 LRP3O75074 770 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 RNF40O75150 1001 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 EGFP01133 1207 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 RETP07949 1114 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 TRIM49P0CI25 452 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 TRIM49CP0CI26 452 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 C7P10643 843 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 CCDC130P13994 396 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 ADORA2BP29275 332 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 PPP1R2P41236 205 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 ASPAP45381 313 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 MXI1P50539 228 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 CACNA2D1P54289 1103 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 MAP3K7CLP57077 242 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 SLC8A3P57103 927 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 ARHGAP8P85298 464 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 INCA1Q0VD86 236 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 PNOCQ13519 176 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 PUM1Q14671 1186 aaKnown RBP eCLIP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 ZNF658Q5TYW1 1059 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 SPOPLQ6IQ16 392 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 NUDT18Q6ZVK8 323 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 FILIP1Q7Z7B0 1213 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 WDR5BQ86VZ2 330 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 FUKQ8N0W3 1084 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 DCLK2Q8N568 766 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 FBXL13Q8NEE6 735 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 RIN3Q8TB24 985 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 SLC2A14Q8TDB8 520 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 SLC39A7Q92504 469 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 OTUB2Q96DC9 234 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 TIGD1Q96MW7 591 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 SDCBP2Q9H190 292 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 FAM124BQ9H5Z6 455 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-222ENST00000506018 FAM49BQ9NUQ9 324 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 SMPD4Q9NXE4 827 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 CFAP97Q9P2B7 532 aa11.03□□□□□ -0.64
NR1I3-222ENST00000506018 E2F8A0AVK6 867 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-222ENST00000506018 SLC16A3O15427 465 aaKnown RBP11.02□□□□□ -0.65
NR1I3-222ENST00000506018 CCDC192P0DO97 292 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 EIF2DP41214 584 aaKnown RBP11.02□□□□□ -0.65
NR1I3-222ENST00000506018 FKBP3Q00688 224 aaKnown RBP11.02□□□□□ -0.65
NR1I3-222ENST00000506018 LRRC63Q05C16 580 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 PPP3CAQ08209 521 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 ZCWPW2Q504Y3 356 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 COBLL1Q53SF7 1204 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 TCERG1LQ5VWI1 586 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 SNX30Q5VWJ9 437 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 BTBD8Q5XKL5 378 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 SYT13Q7L8C5 426 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 TADA2BQ86TJ2 420 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 FMR1NBQ8N0W7 255 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-222ENST00000506018 RPLP0P6Q8NHW5 317 aa11.02□□□□□ -0.65
NR1I3-222ENST00000506018 SCAMP5Q8TAC9 235 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms