RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 SFRP4Q6FHJ7 346 aaPredicted RBP6.89□□□□□ -1.31
CHD1-204ENST00000505982 CYP26C1Q6V0L0 522 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 HTR3DQ70Z44 454 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHD1-204ENST00000505982 STT3BQ8TCJ2 826 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 TMEM171Q8WVE6 324 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 EID2BQ96D98 161 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 ZNF668Q96K58 619 aaPredicted RBP6.89□□□□□ -1.31
CHD1-204ENST00000505982 TBATAQ96M53 351 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 EIF2AK1Q9BQI3 630 aaKnown RBP6.89□□□□□ -1.31
CHD1-204ENST00000505982 TEX101Q9BY14 249 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 GBA2Q9HCG7 927 aaPredicted RBP6.89□□□□□ -1.31
CHD1-204ENST00000505982 KCNE5Q9UJ90 142 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 CA14Q9ULX7 337 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 FPGT-TNNI3KV9GXZ4 949 aa6.89□□□□□ -1.31
CHD1-204ENST00000505982 XDHP47989 1333 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 A0A0B4J269 797 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 MYADML2A6NDP7 307 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 TMEM191CA6NGB0 347 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 RRN3P2A6NIE6 340 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 TRIM24O15164 1050 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 ACTL6BO94805 426 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 VIPP01282 170 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 PPIFP30405 207 aaKnown RBP6.88□□□□□ -1.31
CHD1-204ENST00000505982 AKT1P31749 480 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 TUBB3Q13509 450 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 RRP1BQ14684 758 aaKnown RBP6.88□□□□□ -1.31
CHD1-204ENST00000505982 CERCAMQ5T4B2 595 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 JAKMIP3Q5VZ66 844 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 TANGO2Q6ICL3 276 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 PCSK4Q6UW60 755 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 ADGRG5Q8IZF4 528 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 CLASRPQ8N2M8 674 aaKnown RBP6.88□□□□□ -1.31
CHD1-204ENST00000505982 TTPALQ9BTX7 342 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 ZCWPW1Q9H0M4 648 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 MLXIPQ9HAP2 919 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 SAYSD1Q9NPB0 183 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 HELLSQ9NRZ9 838 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 KIF17Q9P2E2 1029 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 DNAJB11Q9UBS4 358 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 SERTAD3Q9UJW9 196 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 DTNAQ9Y4J8 743 aa6.88□□□□□ -1.31
CHD1-204ENST00000505982 SPATA31A3Q5VYP0 1347 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 A0A1W2PS29 197 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 NCAM2O15394 837 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 CD3EAPO15446 510 aaKnown RBP6.87□□□□□ -1.31
CHD1-204ENST00000505982 ZSCAN9O15535 394 aaPredicted RBP6.87□□□□□ -1.31
CHD1-204ENST00000505982 DNPH1O43598 174 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 SNX2O60749 519 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 PYGLP06737 847 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 ELANEP08246 267 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 HGFP14210 728 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 MTHFSP49914 203 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 PGDP52209 483 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 CXADRP78310 365 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 LMOD3Q0VAK6 560 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 HLXQ14774 488 aaPredicted RBP6.87□□□□□ -1.31
CHD1-204ENST00000505982 GEN1Q17RS7 908 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 DEPDC1Q5TB30 811 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 ATPAF1Q5TC12 328 aaPredicted RBP6.87□□□□□ -1.31
CHD1-204ENST00000505982 ICE2Q659A1 982 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 LVRNQ6Q4G3 990 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 MICALCLQ6ZW33 695 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 TTC30AQ86WT1 665 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 TMEM132CQ8N3T6 1108 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 OTUD7AQ8TE49 926 aaPredicted RBP6.87□□□□□ -1.31
CHD1-204ENST00000505982 ATRIPQ8WXE1 791 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 FAM227BQ96M60 508 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 HIST1H2AAQ96QV6 131 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 NELL2Q99435 816 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 RTKNQ9BST9 563 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 SEPSECSQ9HD40 501 aaKnown RBP6.87□□□□□ -1.31
CHD1-204ENST00000505982 MAP3K2Q9Y2U5 619 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 CHST2Q9Y4C5 530 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.87□□□□□ -1.31
CHD1-204ENST00000505982 TNFRSF18Q9Y5U5 241 aa6.87□□□□□ -1.31
CHD1-204ENST00000505982 ADORA2AP29274 412 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 NTSR1P30989 418 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 SLC5A2P31639 672 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 PDE6CP51160 858 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 BCAT1P54687 386 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 AP2B1P63010 937 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 CCNIQ14094 377 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 VPS53Q5VIR6 699 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 MOGAT3Q86VF5 341 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 C2CD5Q86YS7 1000 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 FTSJ3Q8IY81 847 aaKnown RBP6.86□□□□□ -1.31
CHD1-204ENST00000505982 COLGALT2Q8IYK4 626 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 NRSN1Q8IZ57 195 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 Q8NA96 180 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 ABHD5Q8WTS1 349 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 USP13Q92995 863 aaPredicted RBP6.86□□□□□ -1.31
CHD1-204ENST00000505982 ZBTB45Q96K62 511 aaPredicted RBP6.86□□□□□ -1.31
CHD1-204ENST00000505982 ALOXE3Q9BYJ1 711 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 TRIM5Q9C035 493 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 ZNF69Q9UC07 566 aa6.86□□□□□ -1.31
CHD1-204ENST00000505982 SRP68Q9UHB9 627 aaKnown RBP6.86□□□□□ -1.31
CHD1-204ENST00000505982 TRGV11A0A075B6L2 103 aa6.85□□□□□ -1.31
CHD1-204ENST00000505982 J3KTA2 159 aa6.85□□□□□ -1.31
CHD1-204ENST00000505982 PCDH17O14917 1159 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms