RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 WDR49Q8IV35 697 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 CXorf38Q8TB03 319 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 SPATA18Q8TC71 538 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 HNRNPLLQ8WVV9 542 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 CCDC127Q96BQ5 260 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 BLZF1Q9H2G9 400 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 POLMQ9NP87 494 aaPredicted RBP17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 FAM13BQ9NYF5 915 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 BCCIPQ9P287 314 aaKnown RBP eCLIP17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 TRAV19A0A0A6YYK7 116 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 ATP2C2O75185 946 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 NOL4O94818 638 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 NFATC1O95644 943 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 PDGFRBP09619 1106 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 ITPKAP23677 461 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 CASP1P29466 404 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 USP4Q13107 963 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 PEAR1Q5VY43 1037 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 TMEM92Q6UXU6 159 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 DPH6Q7L8W6 267 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 HS2ST1Q7LGA3 356 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 MINDY1Q8N5J2 469 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 FRMD1Q8N878 549 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 FSIP1Q8NA03 581 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 MYLPFQ96A32 169 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 BBC3Q96PG8 261 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 SNX25Q9H3E2 840 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 MAGEF1Q9HAY2 307 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 FSCN3Q9NQT6 498 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 AGPAT3Q9NRZ7 376 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 MAGEC2Q9UBF1 373 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 CDH9Q9ULB4 789 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 PCDH15Q96QU1 1955 aa17.08■□□□□ 0.32
PDLIM7-213ENST00000505074 UBE4BO95155 1302 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 GABRDO14764 452 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 SERPINF2P08697 491 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 LMO2P25791 158 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 ANXA13P27216 316 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 HOXD13P35453 343 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 GRIK1P39086 918 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 OPRD1P41143 372 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 AFMP43652 599 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 TNNC1P63316 161 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 KCNB1Q14721 858 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 TRIP6Q15654 476 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 MAPRE1Q15691 268 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 CFAP221Q4G0U5 840 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 UNC13DQ70J99 1090 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 TRAPPC11Q7Z392 1133 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 RABEPKQ7Z6M1 372 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 ZNF507Q8TCN5 953 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 ADAMTS14Q8WXS8 1223 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 TRMT2BQ96GJ1 504 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 CYP2S1Q96SQ9 504 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 PKMYT1Q99640 499 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 CGRRF1Q99675 332 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 C7orf25Q9BPX7 421 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 PCDHB9Q9Y5E1 797 aa17.07■□□□□ 0.32
PDLIM7-213ENST00000505074 FREM2Q5SZK8 3169 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 PTPRBP23467 1997 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 AP5Z1O43299 807 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 TADA3O75528 432 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 F13A1P00488 732 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 CD59P13987 128 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 HNRNPLP14866 589 aaKnown RBP eCLIP17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 BDNFP23560 247 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 TRPC3Q13507 836 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 HSF5Q4G112 596 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 CCNI2Q6ZMN8 369 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 EPM2AIP1Q7L775 607 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 CEP57L1Q8IYX8 460 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 PGBD3Q8N328 593 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 XXYLT1Q8NBI6 393 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 TXNDC5Q8NBS9 432 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 OR6B3Q8NGW1 331 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 SH3RF2Q8TEC5 729 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 KBTBD7Q8WVZ9 684 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 SNX21Q969T3 373 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 LRIG1Q96JA1 1093 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 LINC00597Q9H2U6 94 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 SLC39A2Q9NP94 309 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 SCUBE2Q9NQ36 999 aa17.06■□□□□ 0.32
PDLIM7-213ENST00000505074 LOC400499M0QZD8 3231 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 ANTXRLA6NF34 631 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 ARHGAP33O14559 1287 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 TGFB1I1O43294 461 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 PHACTR2O75167 634 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 KLF8O95600 359 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 WARSP23381 471 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 MAGEA11P43364 429 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 CYP24A1Q07973 514 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 PSMD6Q15008 389 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 MAP7D1Q3KQU3 841 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 MDH1BQ5I0G3 518 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 EOGTQ5NDL2 527 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 ALLCQ8N6M5 410 aa17.05■□□□□ 0.32
PDLIM7-213ENST00000505074 ARL14EPQ8N8R7 260 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms