RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 CCDC172P0C7W6 258 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 CD58P19256 250 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 PDE6CP51160 858 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 NRG1Q02297 640 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 ITIH5Q86UX2 942 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZNF683Q8IZ20 524 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 MCOLN2Q8IZK6 566 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZNF687Q8N1G0 1237 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC7A14Q8TBB6 771 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 CALR3Q96L12 384 aaKnown RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 EIF3CQ99613 913 aaKnown RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 CALCOCO1Q9P1Z2 691 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 UXTQ9UBK9 157 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 NAGPAQ9UK23 515 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 LUC7L2Q9Y383 392 aaKnown RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 RTN2O75298 545 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 LATS1O95835 1130 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 ORC1Q13415 861 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 PTPN21Q16825 1174 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 DNAJB7Q7Z6W7 309 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 CEP57Q86XR8 500 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 PPP2R3CQ969Q6 453 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 FBXO44Q9H4M3 255 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 CD207Q9UJ71 328 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 DAB1O75553 588 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 AP1G2O75843 785 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 PLEKP08567 350 aaPredicted RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 SRGAP2BP0DMP2 458 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 MYBL1P10243 752 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 TRIM21P19474 475 aaKnown RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 MRPS5P82675 430 aaKnown RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZXDBP98169 803 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZNF252P-AS1Q0IIN9 211 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 ASIC2Q16515 512 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 HEXIM2Q96MH2 286 aaKnown RBP8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 GDE1Q9NZC3 331 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 MTUS1Q9ULD2 1270 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 CKAP5Q14008 2032 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 GOLGA6L3A6NEY3 463 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 F8VP50 259 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 PTPN2P17706 415 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 MTHFRP42898 656 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 GSDMDP57764 484 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 C3orf20Q8ND61 904 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 KCNF1Q9H3M0 494 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 SMOC2Q9H3U7 446 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 TAS2R14Q9NYV8 317 aa8.73□□□□□ -1.01
CDC42SE2-208ENST00000505065 SHISA7A6NL88 538 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 PER2O15055 1255 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 PTPN9P43378 593 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 ARHGAP44Q17R89 818 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 RIN3Q8TB24 985 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 ATXN2LQ8WWM7 1075 aaKnown RBP8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 KLF16Q9BXK1 252 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 NLRC4Q9NPP4 1024 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 C5orf42Q9H799 3197 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 A0A087X0T9 212 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 CCDC195A0A1B0GUA6 201 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 FAM228BP0C875 321 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 KRT9P35527 623 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 RING1Q06587 406 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 FCHO2Q0JRZ9 810 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 TRIP4Q15650 581 aaPredicted RBP8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZNF77Q15935 545 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 ELMSAN1Q6PJG2 1045 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 MON1AQ86VX9 555 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 NPY6RQ99463 290 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 CHP1Q99653 195 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 NMUR1Q9HB89 426 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 TJP2Q9UDY2 1190 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 SIGLEC16A6NMB1 481 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 KCNU1A8MYU2 1149 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 RFPL2O75678 378 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 RHOP08100 348 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 BMP1P13497 986 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 CPB1P15086 417 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 FOSL2P15408 326 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 MAN1A1P33908 653 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 EPHB3P54753 998 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 DENND5BQ6ZUT9 1274 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 PIWIL1Q96J94 861 aaKnown RBP8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 PPP1R13BQ96KQ4 1090 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 DDX23Q9BUQ8 820 aaKnown RBP8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 FAM49BQ9NUQ9 324 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 ARHGEF38Q9NXL2 777 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 WDR35Q9P2L0 1181 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 ARHGAP26Q9UNA1 814 aa8.72□□□□□ -1.01
CDC42SE2-208ENST00000505065 CDC25CP30307 473 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 MAP3K7CLP57077 242 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 PPM1LQ5SGD2 360 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 RAD9BQ6WBX8 426 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 FAM183BPQ6ZVS7 135 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 TMC6Q7Z403 805 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 LRRC8AQ8IWT6 810 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 HS6ST3Q8IZP7 471 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 ARHGAP18Q8N392 663 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 ELSPBP1Q96BH3 223 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 CHFRQ96EP1 664 aa8.71□□□□□ -1.01
CDC42SE2-208ENST00000505065 LMLNQ96KR4 655 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms