RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 XBP1P17861 261 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 ICAM3P32942 547 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 MLLT6P55198 1093 aaPredicted RBP8.34□□□□□ -1.07
UBE2B-204ENST00000504431 PURAQ00577 322 aaKnown RBP8.34□□□□□ -1.07
UBE2B-204ENST00000504431 TLE2Q04725 743 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 TRIM29Q14134 588 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 NONOQ15233 471 aaKnown RBP eCLIP8.34□□□□□ -1.07
UBE2B-204ENST00000504431 LETM2Q2VYF4 491 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 GRAMD4Q6IC98 578 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 OTOP2Q7RTS6 562 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 CXorf67Q86X51 503 aaPredicted RBP8.34□□□□□ -1.07
UBE2B-204ENST00000504431 REXO1L1PQ8IX06 675 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 CNTD1Q8N815 330 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 PCSK9Q8NBP7 692 aaKnown RBP8.34□□□□□ -1.07
UBE2B-204ENST00000504431 KAT2BQ92831 832 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 LENG9Q96B70 501 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 GLT1D1Q96MS3 346 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 TMEM168Q9H0V1 697 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 GLT8D2Q9H1C3 349 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 TRPV6Q9H1D0 765 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 KCMF1Q9P0J7 381 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 SMC3Q9UQE7 1217 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 Q9Y3F1 56 aa8.34□□□□□ -1.07
UBE2B-204ENST00000504431 GSTTP1A0A1W2PQM5 241 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 MSH4O15457 936 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 CHMP2AO43633 222 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 CCNT1O60563 726 aaKnown RBP8.33□□□□□ -1.08
UBE2B-204ENST00000504431 CCNE2O96020 404 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 CYP3A4P08684 503 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 MARK3P27448 753 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 CST5P28325 142 aaPredicted RBP8.33□□□□□ -1.08
UBE2B-204ENST00000504431 MCM2P49736 904 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 CPT1AP50416 773 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 ITGA7Q13683 1181 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 NEDD9Q14511 834 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 MYBPC3Q14896 1274 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 XRRA1Q6P2D8 792 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 KANSL1Q7Z3B3 1105 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 FERMT3Q86UX7 667 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 FBXO18Q8NFZ0 1043 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 COG1Q8WTW3 980 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 RSAD2Q8WXG1 361 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 ZBTB10Q96DT7 871 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 CEP89Q96ST8 783 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 GPR20Q99678 358 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 ZNF577Q9BSK1 485 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 MTG1Q9BT17 334 aaPredicted RBP8.33□□□□□ -1.08
UBE2B-204ENST00000504431 HTATIP2Q9BUP3 242 aa8.33□□□□□ -1.08
UBE2B-204ENST00000504431 BARX1Q9HBU1 254 aaPredicted RBP8.33□□□□□ -1.08
UBE2B-204ENST00000504431 TRMT13Q9NUP7 481 aaKnown RBP8.33□□□□□ -1.08
UBE2B-204ENST00000504431 TNRC18O15417 2968 aaPredicted RBP8.32□□□□□ -1.08
UBE2B-204ENST00000504431 A0A0G2JNJ9 132 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 TRIM43BA6NCK2 446 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 IPO5O00410 1097 aaKnown RBP8.32□□□□□ -1.08
UBE2B-204ENST00000504431 B4GALT4O60513 344 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 STAM2O75886 525 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 LGALS2P05162 132 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 TGFB3P10600 412 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 CYP2C9P11712 490 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 ITGB8P26012 769 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 TCF7P36402 384 aaPredicted RBP8.32□□□□□ -1.08
UBE2B-204ENST00000504431 HMGN5P82970 282 aaKnown RBP8.32□□□□□ -1.08
UBE2B-204ENST00000504431 CD83Q01151 205 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 ITKQ08881 620 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 CUL4AQ13619 759 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 DGKDQ16760 1214 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 KIAA0753Q2KHM9 967 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 TMEM200BQ69YZ2 307 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 GALNT17Q6IS24 598 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 KCNV1Q6PIU1 500 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 METTL7BQ6UX53 244 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 BMP8AQ7Z5Y6 402 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 NEK8Q86SG6 692 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 FAM124AQ86V42 546 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 RPUSD2Q8IZ73 545 aaKnown RBP8.32□□□□□ -1.08
UBE2B-204ENST00000504431 PPTC7Q8NI37 304 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 ADAMTS17Q8TE56 1095 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 TRIM43Q96BQ3 446 aaPredicted RBP8.32□□□□□ -1.08
UBE2B-204ENST00000504431 PCYT2Q99447 389 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 SDF4Q9BRK5 362 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 C16orf70Q9BSU1 422 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 RNPEPQ9H4A4 650 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 TOPORSQ9NS56 1045 aaPredicted RBP8.32□□□□□ -1.08
UBE2B-204ENST00000504431 SLC9A2Q9UBY0 812 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 Q9UFV3 132 aa8.32□□□□□ -1.08
UBE2B-204ENST00000504431 DDX25Q9UHL0 483 aaKnown RBP8.32□□□□□ -1.08
UBE2B-204ENST00000504431 UMODL1Q5DID0 1318 aa8.31□□□□□ -1.08
UBE2B-204ENST00000504431 A0A0U1RQG5 324 aaPredicted RBP8.31□□□□□ -1.08
UBE2B-204ENST00000504431 VPS37CA5D8V6 355 aaPredicted RBP8.31□□□□□ -1.08
UBE2B-204ENST00000504431 H3BQV1 296 aa8.31□□□□□ -1.08
UBE2B-204ENST00000504431 PPFIA4O75335 1185 aa8.31□□□□□ -1.08
UBE2B-204ENST00000504431 KLHL18O94889 574 aa8.31□□□□□ -1.08
UBE2B-204ENST00000504431 CIITAP33076 1130 aa8.31□□□□□ -1.08
UBE2B-204ENST00000504431 MCM7P33993 719 aa8.31□□□□□ -1.08
UBE2B-204ENST00000504431 ETV4P43268 484 aa8.31□□□□□ -1.08
UBE2B-204ENST00000504431 CDK7P50613 346 aa8.31□□□□□ -1.08
UBE2B-204ENST00000504431 MANFP55145 182 aaKnown RBP8.31□□□□□ -1.08
UBE2B-204ENST00000504431 ACTR2P61160 394 aa8.31□□□□□ -1.08
UBE2B-204ENST00000504431 SAFBQ15424 915 aaKnown RBP eCLIP8.31□□□□□ -1.08
UBE2B-204ENST00000504431 BRDTQ58F21 947 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms