RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 CDC6Q99741 560 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 PARVGQ9HBI0 331 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 A0A1W2PQF6 199 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 ATXN7O15265 892 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 TULP3O75386 442 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 C1QL1O75973 258 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 CER1O95813 267 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 ZNF883P0CG24 379 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 MBL2P11226 248 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 PLA2G2AP14555 144 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 TOB1P50616 345 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 USP46P62068 366 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 TFAMQ00059 246 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 GTF2BQ00403 316 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 FAM171BQ6P995 826 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 ZNF605Q86T29 641 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 ETFBKMTQ8IXQ9 262 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 ADGRF2Q8IZF7 708 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 TOP6BLQ8N6T0 577 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 LRRC52Q8N7C0 313 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 PDCD7Q8N8D1 485 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 TERB1Q8NA31 727 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 PIP4K2CQ8TBX8 421 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 DCBLD2Q96PD2 775 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 TM7SF3Q9NS93 570 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 TOR4AQ9NXH8 423 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 GDAP2Q9NXN4 497 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 SNX9Q9Y5X1 595 aa16.89■□□□□ 0.29
PDLIM7-210ENST00000503827 E2F8A0AVK6 867 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 MEI4A8MW99 385 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 TISP43B9A030 160 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 GABRDO14764 452 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 HCRTO43612 131 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 OAS1P00973 400 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 ATXN1LP0C7T5 689 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 BDNFP23560 247 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 MATKP42679 507 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 ZNF131P52739 623 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 ST3GAL1Q11201 340 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 MAPRE1Q15691 268 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 CRELD2Q6UXH1 353 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 GPBP1Q86WP2 473 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 CHPFQ8IZ52 775 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 RHBDD1Q8TEB9 315 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 CACTINQ8WUQ7 758 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 TTLL2Q9BWV7 592 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 ZHX3Q9H4I2 956 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 GAREM1Q9H706 876 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 PRDM16Q9HAZ2 1276 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 STARD13Q9Y3M8 1113 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 STYXL1Q9Y6J8 313 aa16.88■□□□□ 0.29
PDLIM7-210ENST00000503827 GOLGA8CPA6NN73 597 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 TRIM66O15016 1216 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 FLRT2O43155 660 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 HOXC11O43248 304 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 ATP2C2O75185 946 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 DKK1O94907 266 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 CAMK2BQ13554 666 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 IL27RAQ6UWB1 636 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 MARCH9Q86YJ5 346 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 MIB1Q86YT6 1006 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 CSGALNACT2Q8N6G5 542 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 C1orf127Q8N9H9 656 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 LSM14AQ8ND56 463 aaKnown RBP16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 BAHD1Q8TBE0 780 aaPredicted RBP16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 DNASE2BQ8WZ79 361 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 POMGNT1Q8WZA1 660 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 MYLPFQ96A32 169 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 SYT15Q9BQS2 421 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 IL21RQ9HBE5 538 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 CDH9Q9ULB4 789 aa16.87■□□□□ 0.29
PDLIM7-210ENST00000503827 E9PAM4 449 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 CILPO75339 1184 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 KRT18P05783 430 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 KRT19P08727 400 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 PLCG1P19174 1290 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 CD6P30203 668 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 NOP14P78316 857 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 CYP27A1Q02318 531 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 DHX8Q14562 1220 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 POSTNQ15063 836 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 SOWAHAQ2M3V2 549 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 ANO4Q32M45 955 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 TMEM119Q4V9L6 283 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 TDRD10Q5VZ19 366 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 EGFLAMQ63HQ2 1017 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 KIAA1324Q6UXG2 1013 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 ZCCHC9Q8N567 271 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 ERLEC1Q96DZ1 483 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 SLITRK1Q96PX8 696 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 MIR1-1HGQ9H1L0 117 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 CD248Q9HCU0 757 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 CD93Q9NPY3 652 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 ITGA11Q9UKX5 1188 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 HCN2Q9UL51 889 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 SH3BP1Q9Y3L3 701 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 NFE2L3Q9Y4A8 694 aa16.86■□□□□ 0.29
PDLIM7-210ENST00000503827 PCDHGB2Q9Y5G2 931 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms