RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 POLR2DO15514 142 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ASMTLO95671 621 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SLC25A27O95847 323 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TTLL1O95922 423 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 LYNP07948 512 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF865P0CJ78 1059 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CR2P20023 1033 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PTDSS1P48651 473 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FKBP3Q00688 224 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PPIDQ08752 370 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 AP1B1Q10567 949 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 KRR1Q13601 381 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 GALNTL6Q49A17 601 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 IQCCQ4KMZ1 466 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MFSD4BQ5TF39 518 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FAM109BQ6ICB4 259 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 OR52E8Q6IFG1 317 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 C3orf62Q6ZUJ4 267 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ASRGL1Q7L266 308 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 METTL3Q86U44 580 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ANKRD13BQ86YJ7 626 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CKAP2Q8WWK9 683 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 BORCS5Q969J3 196 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SYTL4Q96C24 671 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 OTUD5Q96G74 571 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF333Q96JL9 665 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SYT15Q9BQS2 421 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SIKE1Q9BRV8 207 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 LACRTQ9GZZ8 138 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PANK4Q9NVE7 773 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 STK39Q9UEW8 545 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 RABGEF1Q9UJ41 708 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PTBP2Q9UKA9 531 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 HBS1LQ9Y450 684 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 A0A0G2JLW4 131 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TLDC2A0PJX2 215 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF213O14771 459 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SEC14L5O43304 696 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SPAG7O75391 227 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 HAUS5O94927 633 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TNFAIP8O95379 198 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ABL1P00519 1130 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PRR35P0CG20 571 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 IBSPP21815 317 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MMP8P22894 467 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TUBP50607 506 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 HDAC4P56524 1084 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 USP46P62068 366 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 COG7P83436 770 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CDC42EP1Q00587 391 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MTF1Q14872 753 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PSMD6Q15008 389 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TCP11X2Q5H9J9 407 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TUBA3EQ6PEY2 450 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TIFABQ6ZNK6 161 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CYFIP1Q7L576 1253 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 LONP2Q86WA8 852 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 DDX42Q86XP3 938 aaKnown RBP eCLIP2.91□□□□□ -1.949e-8■■■■■ 81.4
NEDD4-204ENST00000503468 TPH2Q8IWU9 490 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 KIRREL3Q8IZU9 778 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SLC44A5Q8NCS7 719 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FNDC8Q8TC99 324 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CALML6Q8TD86 181 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FRS2Q8WU20 508 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SELENOSQ9BQE4 189 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ERP44Q9BS26 406 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TRAF4Q9BUZ4 470 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 NUF2Q9BZD4 464 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 VTA1Q9NP79 307 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 C8orf4Q9NR00 106 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 FBXO40Q9UH90 709 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 NDOR1Q9UHB4 597 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 DRG1Q9Y295 367 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 R3HDM2Q9Y2K5 976 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PCDHB2Q9Y5E7 798 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 KANSL1LA0AUZ9 987 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TBKBP1A7MCY6 615 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TCP10L2B9ZVM9 353 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 CACNB4O00305 520 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SKAP2O75563 359 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 TPPPO94811 219 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 OAZ2O95190 189 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MBD4O95243 580 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 POLR3DP05423 398 aaPredicted RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 IFIT1P09914 478 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ERGP11308 486 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF24P17028 368 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 HIBADHP31937 336 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 STIP1P31948 543 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 GJA5P36382 358 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 HALP42357 657 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 MATR3P43243 847 aaKnown RBP eCLIP2.91□□□□□ -1.948e-6■■■□□ 17.4
NEDD4-204ENST00000503468 GEMIN4P57678 1058 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 ARHGAP1Q07960 439 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SSRP1Q08945 709 aaKnown RBP2.91□□□□□ -1.94
NEDD4-204ENST00000503468 Q6ZSR3 168 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 PEX26Q7Z412 305 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SYNE4Q8N205 404 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 GALNT6Q8NCL4 622 aa2.91□□□□□ -1.94
NEDD4-204ENST00000503468 SYTL5Q8TDW5 730 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms