RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ACADSBP45954 432 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 TKTL1P51854 596 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ATXN1P54253 815 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 HDAC4P56524 1084 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 DAOAP59103 153 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 MRPS5P82675 430 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 TSPY1Q01534 308 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ITIH3Q06033 890 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 CKAP4Q07065 602 aaKnown RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 BTG3Q14201 252 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 PIGHQ14442 188 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ELF2Q15723 593 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 KCTD19Q17RG1 926 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ERCC6LQ2NKX8 1250 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 CFAP221Q4G0U5 840 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 CTXN3Q4LDR2 81 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 RASIP1Q5U651 963 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 SDHAF4Q5VUM1 108 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ZNF280DQ6N043 979 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 CC2D1AQ6P1N0 951 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 RNF19BQ6ZMZ0 732 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ARCQ7LC44 396 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 SPRED2Q7Z698 418 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ZDHHC17Q8IUH5 632 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 KATNAL2Q8IYT4 538 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 CEP112Q8N8E3 955 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 MNS1Q8NEH6 495 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 SPATA4Q8NEY3 305 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 PIK3R5Q8WYR1 880 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 HERVK_113Q902F9 699 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 CENPIQ92674 756 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ACSF2Q96CM8 615 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 PGLYRP2Q96PD5 576 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC2A13Q96QE2 648 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 CNPY3Q9BT09 278 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 TTPALQ9BTX7 342 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 UBXN6Q9BZV1 441 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 DNAI2Q9GZS0 605 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ANKZF1Q9H8Y5 726 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 DMAP1Q9NPF5 467 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ABI2Q9NYB9 513 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 MTRRQ9UBK8 725 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 TTC7AQ9ULT0 858 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ZMYND8Q9ULU4 1186 aaPredicted RBP7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 USP3Q9Y6I4 520 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 DENND4CQ5VZ89 1909 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 ANAPC1Q9H1A4 1944 aa7.24□□□□□ -1.25
TOPBP1-203ENST00000503464 WDR27A2RRH5 827 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 CTAGE15A4D2H0 777 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 ZBBXA8MT70 800 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 I6L893 689 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 PGRMC1O00264 195 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 MAP3K13O43283 966 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 SOAT2O75908 522 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 FGGP02679 453 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 SOD2P04179 222 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 USP17L7P0C7H9 530 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 CTAGE8P0CG41 777 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 PDGFRAP16234 1089 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 LAG3P18627 525 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 MIPP30301 263 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 GJC1P36383 396 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 PTPN9P43378 593 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 ALDH7A1P49419 539 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 ARSEP51690 589 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 RWDD2BP57060 319 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 USP46P62068 366 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 MRPS25P82663 173 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 ROR1Q01973 937 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 DSG1Q02413 1049 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 ADCY2Q08462 1091 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 ELAVL2Q12926 359 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 GPR17Q13304 367 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 KLF1Q13351 362 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 LLGL1Q15334 1064 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 MAPRE1Q15691 268 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 TAZQ16635 292 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 TEX35Q5T0J7 233 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 LRRC38Q5VT99 294 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 SYPL2Q5VXT5 272 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 PM20D1Q6GTS8 502 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 FAM109BQ6ICB4 259 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 SLC8B1Q6J4K2 584 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 PSRC1Q6PGN9 363 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 CTAGE6Q86UF2 777 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 SPATA2LQ8IUW3 424 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 HERC6Q8IVU3 1022 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 CTAGE4Q8IX94 777 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 RHOT1Q8IXI2 618 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 DCP1BQ8IZD4 617 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 SCML4Q8N228 414 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 MMGT1Q8N4V1 131 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 UBL4BQ8N7F7 174 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 ATAD1Q8NBU5 361 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 SCAMP5Q8TAC9 235 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 RIN2Q8WYP3 895 aaPredicted RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 RAPGEF5Q92565 580 aa7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 CLP1Q92989 425 aaKnown RBP7.23□□□□□ -1.25
TOPBP1-203ENST00000503464 NT5C3BQ969T7 300 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms