RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 RUBCNQ92622 972 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 CLP1Q92989 425 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 FAM149B1Q96BN6 582 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 SPATA17Q96L03 361 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 RNPC3Q96LT9 517 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 TBCBQ99426 244 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 PSMB7Q99436 277 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 LPIN3Q9BQK8 851 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 DDX23Q9BUQ8 820 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 POPDC2Q9HBU9 364 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 HOMER3Q9NSC5 361 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 ABI2Q9NYB9 513 aaPredicted RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 TJP2Q9UDY2 1190 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 EFR3BQ9Y2G0 817 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 NR2E3Q9Y5X4 410 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 MRPL42Q9Y6G3 142 aaKnown RBP8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 USP3Q9Y6I4 520 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 TSC2P49815 1807 aa8.52□□□□□ -1.05
TOPBP1-202ENST00000503338 FAM170AA1A519 330 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 HHLA1C9JL84 531 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 F8VP50 259 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 DYNC1I1O14576 645 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 CAPN9O14815 690 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 PRPSAP2O60256 369 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 LRCH4O75427 683 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 BEST1O76090 585 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 F9P00740 461 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 LTFP02788 710 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 ATP2A2P16615 1042 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 PTPN7P35236 360 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 SLC5A3P53794 718 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 AIF1P55008 147 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 DAOAP59103 153 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 OGDHQ02218 1023 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 ADCY1Q08828 1119 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 ZNF252P-AS1Q0IIN9 211 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 SMC1AQ14683 1233 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 LONRF2Q1L5Z9 754 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 SLC25A52Q3SY17 297 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 CCDC14Q49A88 953 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 RTP2Q5QGT7 225 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 ZFYVE27Q5T4F4 411 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 FAM117BQ6P1L5 589 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 C16orf59Q7L2K0 433 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 RSRC2Q7L4I2 434 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 HERC6Q8IVU3 1022 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 MAP7D3Q8IWC1 876 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 MMGT1Q8N4V1 131 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 GPR161Q8N6U8 529 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 EMC1Q8N766 993 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 FBXO22Q8NEZ5 403 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 SP7Q8TDD2 431 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 TEKT4Q8WW24 435 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 RIN2Q8WYP3 895 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 CENPIQ92674 756 aaPredicted RBP8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 ALG3Q92685 438 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 KRT35Q92764 455 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 DPF3Q92784 378 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 SLC2A13Q96QE2 648 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 TMEM209Q96SK2 561 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 KCNK16Q96T55 309 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 ULBP1Q9BZM6 244 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 TRIM7Q9C029 511 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 PRDM16Q9HAZ2 1276 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 MRPL17Q9NRX2 175 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 TMLHEQ9NVH6 421 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 FNIP2Q9P278 1114 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 AFF4Q9UHB7 1163 aaKnown RBP8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 USP18Q9UMW8 372 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 LZTS1Q9Y250 596 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 USTQ9Y2C2 406 aa8.51□□□□□ -1.05
TOPBP1-202ENST00000503338 COL4A6Q14031 1691 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 TARSL2A2RTX5 802 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 MTMR11A4FU01 709 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 ZNF487B1APH4 448 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 PIK3R2O00459 728 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 KRIT1O00522 736 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 FSCN2O14926 492 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 MDM4O15151 490 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 TLL1O43897 1013 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 GABBR2O75899 941 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 TJP3O95049 919 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 GJB6O95452 261 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 TRUB2O95900 331 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 FGGP02679 453 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 HAPLN1P10915 354 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 PYGMP11217 842 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 CYP2F1P24903 491 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 MIPP30301 263 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 GBP1P32455 592 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 RDXP35241 583 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 FLT3P36888 993 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 PBX3P40426 434 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 PSEN1P49768 467 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 ZNF135P52742 658 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 SLC25A11Q02978 314 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 UBE3AQ05086 875 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 MTA1Q13330 715 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 PDK2Q15119 407 aa8.5□□□□□ -1.05
TOPBP1-202ENST00000503338 PTPROQ16827 1216 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms