RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 AGAP11Q8TF27 550 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 CPLX3Q8WVH0 158 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 SCG3Q8WXD2 468 aaKnown RBP4.78□□□□□ -1.64
MATR3-202ENST00000502422 ING5Q8WYH8 240 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 IRF7Q92985 503 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 RBM41Q96IZ5 413 aaKnown RBP4.78□□□□□ -1.64
MATR3-202ENST00000502422 SEC16BQ96JE7 1060 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 CAPZA3Q96KX2 299 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 MBOAT7Q96N66 472 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 LRRC1Q9BTT6 524 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 MKNK1Q9BUB5 465 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 NIFKQ9BYG3 293 aaKnown RBP4.78□□□□□ -1.64
MATR3-202ENST00000502422 IFT122Q9HBG6 1241 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 PANK4Q9NVE7 773 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 SEPT3Q9UH03 358 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 BAIAP2L1Q9UHR4 511 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 HOOK1Q9UJC3 728 aaKnown RBP4.78□□□□□ -1.64
MATR3-202ENST00000502422 FBXO9Q9UK97 447 aaPredicted RBP4.78□□□□□ -1.64
MATR3-202ENST00000502422 FBXW11Q9UKB1 542 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 MAN1B1Q9UKM7 699 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 ASB3Q9Y575 518 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 COL4A3BPQ9Y5P4 624 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 SAR1BQ9Y6B6 198 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 WDFY3Q8IZQ1 3526 aa4.78□□□□□ -1.64
MATR3-202ENST00000502422 SF3B1O75533 1304 aaKnown RBP eCLIP4.78□□□□□ -1.648e-6■□□□□ 8
MATR3-202ENST00000502422 IGKV6-21A0A0C4DH24 114 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 DPPA5A6NC42 116 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 TMEM150BA6NC51 233 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 CHURC1-FNTBB4DL54 471 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 E7EVH7 732 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 F8W810 466 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 AXIN1O15169 862 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 TRAPPC3O43617 180 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 DIAPH2O60879 1101 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 WFS1O76024 890 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 TNFRSF8P28908 595 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 MARCKSP29966 332 aaPredicted RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 GNA11P29992 359 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 HOXA9P31269 272 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 CD151P48509 253 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 FNTBP49356 437 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 TUBP50607 506 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 ZBED6P86452 979 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 RELBQ01201 579 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 EXOSC10Q01780 885 aaKnown RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 FZD5Q13467 585 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 MORC3Q14149 939 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 KRT32Q14532 448 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 ZNF268Q14587 947 aaPredicted RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 SLC39A14Q15043 492 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 PTPAQ15257 358 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 TARBP2Q15633 366 aaKnown RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 PSMD5Q16401 504 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 UGCGQ16739 394 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 RTN1Q16799 776 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 GLE1Q53GS7 698 aaKnown RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 NT5DC1Q5TFE4 455 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 FAM171A1Q5VUB5 890 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 NUGGCQ68CJ6 796 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 ZNF280DQ6N043 979 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 NOTUMQ6P988 496 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 PDXDC1Q6P996 788 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 EMBQ6PCB8 327 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 LONP2Q86WA8 852 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 TMTC1Q8IUR5 882 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 NPAS3Q8IXF0 933 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 REXO1Q8N1G1 1221 aaKnown RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 GLIS3Q8NEA6 775 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 SLC7A14Q8TBB6 771 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 PSPC1Q8WXF1 523 aaKnown RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 DNASE1L2Q92874 299 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 HVCN1Q96D96 273 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 CCDC51Q96ER9 411 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 ZFP42Q96MM3 310 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 RIT2Q99578 217 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 GORASP1Q9BQQ3 440 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 TTPALQ9BTX7 342 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 TRMT61BQ9BVS5 477 aaKnown RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 ARRDC1-AS1Q9H2J1 176 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 ZNF395Q9H8N7 513 aaPredicted RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 ZFP14Q9HCL3 533 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 PCMTD2Q9NV79 361 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 MIOSQ9NXC5 875 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 GDE1Q9NZC3 331 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 SCHIP1Q9P0W5 487 aaPredicted RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 SLC12A6Q9UHW9 1150 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 KCNH3Q9ULD8 1083 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 TFR2Q9UP52 801 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 SLC12A4Q9UP95 1085 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 IPPQ9Y573 584 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.77□□□□□ -1.65
MATR3-202ENST00000502422 CNOT1A5YKK6 2376 aaKnown RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 CNTNAP5Q8WYK1 1306 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 SPEGQ15772 3267 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 GMNCA6NCL1 334 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 A6NJY4 79 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 PDLIM1O00151 329 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 PES1O00541 588 aaKnown RBP4.77□□□□□ -1.65
MATR3-202ENST00000502422 MSH4O15457 936 aa4.77□□□□□ -1.65
MATR3-202ENST00000502422 ZBTB43O43298 467 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms