RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 C1orf228Q6PIY5 440 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 LCLAT1Q6UWP7 414 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 OTOAQ7RTW8 1153 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 CCDC91Q7Z6B0 441 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 ZNF276Q8N554 614 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 TCP10LQ8TDR4 215 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 ZNF75CPQ92670 426 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-204ENST00000501271 GPATCH2LQ9NWQ4 482 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 DPP3Q9NY33 737 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 SLC17A7Q9P2U7 560 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 ITGA11Q9UKX5 1188 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 STK38LQ9Y2H1 464 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.29□□□□□ -0.76
CLIP1-204ENST00000501271 USH1CQ9Y6N9 552 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 TCRBV9S1A1TA0A576 114 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 WDR91A4D1P6 747 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 KBTBD13C9JR72 458 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 SMAPO00193 183 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 AVILO75366 819 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 IL4RP24394 825 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 PPIL2Q13356 520 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 GOLGA7BQ2TAP0 167 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 CCDC14Q49A88 953 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
CLIP1-204ENST00000501271 TAPT1Q6NXT6 567 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 MAMDC4Q6UXC1 1216 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 BANPQ8N9N5 519 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 AGAP11Q8TF27 550 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 OPTNQ96CV9 577 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 RNF157Q96PX1 679 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 MROH8Q9H579 483 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 GBA2Q9HCG7 927 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-204ENST00000501271 CYLDQ9NQC7 956 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-204ENST00000501271 H7C0C1 242 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 PRPSAP2O60256 369 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 MAP3K6O95382 1288 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 MYCNP04198 464 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-204ENST00000501271 ATP5OP48047 213 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 GCLCP48506 637 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-204ENST00000501271 RBP5P82980 135 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 TTLL12Q14166 644 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-204ENST00000501271 KBTBD12Q3ZCT8 623 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 PPP1R26Q5T8A7 1209 aaPredicted RBP10.28□□□□□ -0.76
CLIP1-204ENST00000501271 PMF1Q6P1K2 205 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 OLFML1Q6UWY5 402 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 TTC30AQ86WT1 665 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 PQLC3Q8N755 202 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 PLD5Q8N7P1 536 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 LRRN4Q8WUT4 740 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 AFG1LQ8WV93 481 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 NLRP7Q8WX94 980 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 UTP4Q969X6 686 aaKnown RBP10.28□□□□□ -0.76
CLIP1-204ENST00000501271 KIF12Q96FN5 646 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 ACAP3Q96P50 834 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 LRRC37BQ96QE4 947 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 NT5C1AQ9BXI3 368 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 USP29Q9HBJ7 922 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 ETNK1Q9HBU6 452 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 MCM8Q9UJA3 840 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 C2CD2Q9Y426 696 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 L3MBTL1Q9Y468 752 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 NME7Q9Y5B8 376 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 TEX264Q9Y6I9 313 aa10.28□□□□□ -0.76
CLIP1-204ENST00000501271 ASB14A6NK59 587 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 PPEF2O14830 753 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 CYP2C8P10632 490 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 TSHRP16473 764 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 OSBPP22059 807 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 TARSP26639 723 aaKnown RBP10.27□□□□□ -0.76
CLIP1-204ENST00000501271 STIP1P31948 543 aaKnown RBP10.27□□□□□ -0.76
CLIP1-204ENST00000501271 GBP2P32456 591 aaPredicted RBP10.27□□□□□ -0.76
CLIP1-204ENST00000501271 PTK7Q13308 1070 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 LAMC2Q13753 1193 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 TFDP2Q14188 446 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 KRT81Q14533 505 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 SETDB1Q15047 1291 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 CA9Q16790 459 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 FAM47CQ5HY64 1035 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 FAXCQ5TGI0 409 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 SCYL2Q6P3W7 929 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 MTHFD1LQ6UB35 978 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.27□□□□□ -0.76
CLIP1-204ENST00000501271 FAM172AQ8WUF8 416 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 FAF2Q96CS3 445 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 CDCA5Q96FF9 252 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 STAMBPL1Q96FJ0 436 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 SERAC1Q96JX3 654 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 TMEM237Q96Q45 408 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 CYTH2Q99418 400 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 MRPL45Q9BRJ2 306 aaKnown RBP10.27□□□□□ -0.76
CLIP1-204ENST00000501271 NGRNQ9NPE2 291 aaKnown RBP10.27□□□□□ -0.76
CLIP1-204ENST00000501271 TXLNGQ9NUQ3 528 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 FAM49BQ9NUQ9 324 aa10.27□□□□□ -0.76
CLIP1-204ENST00000501271 A0A1B0GUA9 196 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 TM9SF1O15321 606 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 CHADO15335 359 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 KCNN4O15554 427 aa10.27□□□□□ -0.77
CLIP1-204ENST00000501271 STAU1O95793 577 aaKnown RBP10.27□□□□□ -0.77
CLIP1-204ENST00000501271 EZRP15311 586 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms