RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 TPSD1Q9BZJ3 242 aa12.79□□□□□ -0.36
CNOT4-211ENST00000498534 POLMQ9NP87 494 aaPredicted RBP12.79□□□□□ -0.36
CNOT4-211ENST00000498534 CHORDC1Q9UHD1 332 aaPredicted RBP12.79□□□□□ -0.36
CNOT4-211ENST00000498534 EML5Q05BV3 1969 aa12.79□□□□□ -0.36
CNOT4-211ENST00000498534 ABCA7Q8IZY2 2146 aa12.79□□□□□ -0.36
CNOT4-211ENST00000498534 A0A0A0MRY4 1105 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 PVALEFA0A1B0GWK0 134 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 E2F8A0AVK6 867 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 C4orf47A7E2U8 309 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 K7ELQ4 463 aaPredicted RBP12.78□□□□□ -0.36
CNOT4-211ENST00000498534 CLDN5O00501 218 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 POLR2DO15514 142 aaKnown RBP12.78□□□□□ -0.36
CNOT4-211ENST00000498534 EXOC3O60645 756 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 KAT7O95251 611 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 YEATS4O95619 227 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 OLFM2O95897 454 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 OAS1P00973 400 aaKnown RBP12.78□□□□□ -0.36
CNOT4-211ENST00000498534 PDIA4P13667 645 aaKnown RBP12.78□□□□□ -0.36
CNOT4-211ENST00000498534 PMLP29590 882 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 GRIA2P42262 883 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 TNFRSF4P43489 277 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 SLC6A11P48066 632 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 BIRC3Q13489 604 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 BYSLQ13895 437 aaKnown RBP12.78□□□□□ -0.36
CNOT4-211ENST00000498534 KNOP1Q1ED39 458 aaKnown RBP12.78□□□□□ -0.36
CNOT4-211ENST00000498534 EOGTQ5NDL2 527 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 HECTD3Q5T447 861 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 LCE2DQ5TA82 110 aaPredicted RBP12.78□□□□□ -0.36
CNOT4-211ENST00000498534 BTBD8Q5XKL5 378 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 PMS2CLQ68D20 193 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 SHC4Q6S5L8 630 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 RASSF3Q86WH2 238 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 ALLCQ8N6M5 410 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 ZNF516Q92618 1163 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 FBXO32Q969P5 355 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 OTUB2Q96DC9 234 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 TNIP3Q96KP6 325 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 SPACA7Q96KW9 195 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 ZNF518BQ9C0D4 1074 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 DPEP3Q9H4B8 488 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 SLC39A2Q9NP94 309 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 ARHGEF4Q9NR80 690 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 FAM13BQ9NYF5 915 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 SH3BP1Q9Y3L3 701 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 LAMA1P25391 3075 aa12.78□□□□□ -0.36
CNOT4-211ENST00000498534 SCAMP3O14828 347 aaKnown RBP12.77□□□□□ -0.37
CNOT4-211ENST00000498534 KLF8O95600 359 aaPredicted RBP12.77□□□□□ -0.37
CNOT4-211ENST00000498534 ADH5P11766 374 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 P4HA1P13674 534 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 DHPSP49366 369 aaPredicted RBP12.77□□□□□ -0.37
CNOT4-211ENST00000498534 CACNA2D1P54289 1103 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 SHC2P98077 582 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 GAD2Q05329 585 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 GAB4Q2WGN9 574 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 PSAPL1Q6NUJ1 521 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 LPCAT2Q7L5N7 544 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 CYP2U1Q7Z449 544 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 C12orf56Q8IXR9 622 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 PGBD3Q8N328 593 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 TXNDC5Q8NBS9 432 aaKnown RBP12.77□□□□□ -0.37
CNOT4-211ENST00000498534 WHAMMQ8TF30 809 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 KCNK16Q96T55 309 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 NACA2Q9H009 215 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 XYLT2Q9H1B5 865 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 BLZF1Q9H2G9 400 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 TMEM9BQ9NQ34 198 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 COMMD8Q9NX08 183 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 BCCIPQ9P287 314 aaKnown RBP eCLIP12.77□□□□□ -0.37
CNOT4-211ENST00000498534 NME7Q9Y5B8 376 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 THADAQ6YHU6 1953 aa12.77□□□□□ -0.37
CNOT4-211ENST00000498534 HELZP42694 1942 aaKnown RBP12.76□□□□□ -0.37
CNOT4-211ENST00000498534 LNP1A1A4G5 178 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 TBC1D3BA6NDS4 549 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 ZBTB24O43167 697 aaPredicted RBP12.76□□□□□ -0.37
CNOT4-211ENST00000498534 COCHO43405 550 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 TRIM21P19474 475 aaKnown RBP12.76□□□□□ -0.37
CNOT4-211ENST00000498534 AFMP43652 599 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 ME1P48163 572 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 NOVA1P51513 510 aaKnown RBP12.76□□□□□ -0.37
CNOT4-211ENST00000498534 CDH8P55286 799 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 NCOA4Q13772 614 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 BMT2Q1RMZ1 405 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 ZNF699Q32M78 642 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 LY6G5CQ5SRR4 150 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 TMEM92Q6UXU6 159 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 CEP57L1Q8IYX8 460 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 IL17RCQ8NAC3 791 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 MDGA1Q8NFP4 955 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 KCNV2Q8TDN2 545 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 PIGKQ92643 395 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 SMARCD1Q96GM5 515 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 VRTNQ9H8Y1 702 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 DMAP1Q9NPF5 467 aaPredicted RBP12.76□□□□□ -0.37
CNOT4-211ENST00000498534 TMEM30AQ9NV96 361 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 DEC1Q9P2X7 70 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 CEP295Q9C0D2 2601 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 PTPRDP23468 1912 aa12.76□□□□□ -0.37
CNOT4-211ENST00000498534 SGK1O00141 431 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms