RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 APPL1Q9UKG1 709 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 VAV3Q9UKW4 847 aa13.5□□□□□ -0.25
VEGFA-215ENST00000497139 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 ECE1P42892 770 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 TMED10P49755 219 aaKnown RBP13.49□□□□□ -0.25
VEGFA-215ENST00000497139 LGSNQ5TDP6 509 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 LRRC38Q5VT99 294 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 ENOSF1Q7L5Y1 443 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 TRIML2Q8N7C3 387 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 NAT8LQ8N9F0 302 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 KAT5Q92993 513 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 FAM118BQ9BPY3 351 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 CDCA7Q9BWT1 371 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-215ENST00000497139 NYXQ9GZU5 481 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 IKZF4Q9H2S9 585 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-215ENST00000497139 PRPF19Q9UMS4 504 aaKnown RBP13.49□□□□□ -0.25
VEGFA-215ENST00000497139 APOBEC2Q9Y235 224 aaKnown RBP13.49□□□□□ -0.25
VEGFA-215ENST00000497139 LOXHD1Q8IVV2 1947 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 AHDC1Q5TGY3 1603 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-215ENST00000497139 A0A0B4J269 797 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 ESRRBO95718 433 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 GCLMP48507 274 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 ENTPD1P49961 510 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 DLG4P78352 724 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 KCNC4Q03721 635 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 TUBB3Q13509 450 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 CHI3L2Q15782 390 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 PRR16Q569H4 304 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 RALGPS1Q5JS13 557 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 C1orf220Q5T0J3 134 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 DCDC5Q6ZRR9 648 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 RHPN2Q8IUC4 686 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 NUDCD3Q8IVD9 361 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 VCPIP1Q96JH7 1222 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 PNPLA8Q9NP80 782 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 SELENONQ9NZV5 590 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 HESX1Q9UBX0 185 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 HERC5Q9UII4 1024 aaKnown RBP13.49□□□□□ -0.25
VEGFA-215ENST00000497139 GNEQ9Y223 722 aaKnown RBP13.49□□□□□ -0.25
VEGFA-215ENST00000497139 COQ4Q9Y3A0 265 aa13.49□□□□□ -0.25
VEGFA-215ENST00000497139 GPC6Q9Y625 555 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-215ENST00000497139 SFI1A8K8P3 1242 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 KRT37O76014 449 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 FBXO21O94952 628 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 PROCP04070 461 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 OCM2P0CE71 109 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 OCMP0CE72 109 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 MAPTP10636 758 aaKnown RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 COL6A2P12110 1019 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 GPC3P51654 580 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 ANGEL2Q5VTE6 544 aaKnown RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 IYDQ6PHW0 289 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 ELMSAN1Q6PJG2 1045 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 DDHD1Q8NEL9 900 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 HM13Q8TCT9 377 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 DLG3Q92796 817 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 LENG9Q96B70 501 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 SLITRK1Q96PX8 696 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 RANBP9Q96S59 729 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 SERPINI1Q99574 410 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 SCINQ9Y6U3 715 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 MYPNQ86TC9 1320 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 WTIPA6NIX2 430 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 BMP10O95393 424 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 PDGFRBP09619 1106 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 PSMC3P17980 439 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 CIITAP33076 1130 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 TAS2R40P59535 323 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 TXNL4AP83876 142 aaKnown RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 FAAP100Q0VG06 881 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 INAQ16352 499 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 INTS5Q6P9B9 1019 aaKnown RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 POU5F2Q8N7G0 328 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 TERB1Q8NA31 727 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 MARCH10Q8NA82 808 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 GPCPD1Q9NPB8 672 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 UTP6Q9NYH9 597 aaKnown RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 STK39Q9UEW8 545 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 RIMS3Q9UJD0 308 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 ARHGAP26Q9UNA1 814 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 TPD52L2O43399 206 aaKnown RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 FOSP01100 380 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 ITGAXP20702 1163 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 FNBP1LQ5T0N5 605 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 SLC26A11Q86WA9 606 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 HELQQ8TDG4 1101 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 CHPT1Q8WUD6 406 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 CPT1BQ92523 772 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 DHX38Q92620 1227 aaKnown RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 EME1Q96AY2 570 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 NT5C1BQ96P26 610 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 PPP1R10Q96QC0 940 aaKnown RBP13.48□□□□□ -0.25
VEGFA-215ENST00000497139 DNAJC28Q9NX36 388 aa13.48□□□□□ -0.25
VEGFA-215ENST00000497139 IGKV6D-41A0A0C4DH26 115 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 SNRPAP09012 282 aaKnown RBP13.47□□□□□ -0.25
VEGFA-215ENST00000497139 ETS1P14921 441 aa13.47□□□□□ -0.25
VEGFA-215ENST00000497139 CD58P19256 250 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms