RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 INSL5Q9Y5Q6 135 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 SMIM28A0A1B0GU29 152 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 SYNCRIPO60506 623 aaKnown RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 CXCL8P10145 99 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 GARTP22102 1010 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 ADSSP30520 456 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 CLCN4P51793 760 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 SND1Q7KZF4 910 aaKnown RBP eCLIP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 RDH13Q8NBN7 331 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 TSTD1Q8NFU3 115 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 KCNN1Q92952 543 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 SUSD3Q96L08 255 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 AGPAT1Q99943 283 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 TBC1D14Q9P2M4 693 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 POLR3GO15318 223 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 SYF2O95926 243 aaKnown RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 ATP4AP20648 1035 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 GTF2H1P32780 548 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 TNNT3P45378 269 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 NNTQ13423 1086 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 DNAAF5Q86Y56 855 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 SIX6OS1Q8N1H7 587 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 ZNF557Q8N988 423 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 CAVIN3Q969G5 261 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 FAM81BQ96LP2 452 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 UBE2TQ9NPD8 197 aaPredicted RBP8.98□□□□□ -0.97
VPS13B-206ENST00000496144 STIM2Q9P246 746 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 IRAK3Q9Y616 596 aa8.98□□□□□ -0.97
VPS13B-206ENST00000496144 RHOP08100 348 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 POLR2BP30876 1174 aaKnown RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 BRCC3P46736 316 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 USP39Q53GS9 565 aaKnown RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 C8orf74Q6P047 294 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 ZNF771Q7L3S4 317 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 ZNF461Q8TAF7 563 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 SPATA18Q8TC71 538 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 LACTBL1A8MY62 500 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 CD19P15391 556 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 GNL1P36915 607 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 RPS6KA1Q15418 735 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 CDCA2Q69YH5 1023 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 GIPC2Q8TF65 315 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 TAF4BQ92750 862 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 PGLYRP2Q96PD5 576 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 NTPCRQ9BSD7 190 aaKnown RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 RXFP1Q9HBX9 757 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 MED4Q9NPJ6 270 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 MTRRQ9UBK8 725 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 FRMPD3Q5JV73 1810 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 BHMG1C9JSJ3 638 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 DDX3YO15523 660 aaKnown RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 H2AFZP0C0S5 128 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 PSMC3P17980 439 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 CLCNKBP51801 687 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 GALCP54803 685 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 SNRNP35Q16560 246 aaKnown RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 INAVAQ3KP66 663 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 ITPRIPL2Q3MIP1 535 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 H2AFVQ71UI9 128 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 TAS1R3Q7RTX0 852 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 SLC35G2Q8TBE7 412 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 FAM126AQ9BYI3 521 aaPredicted RBP8.97□□□□□ -0.97
VPS13B-206ENST00000496144 MIS12Q9H081 205 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 IFT122Q9HBG6 1241 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 C2CD2Q9Y426 696 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 GOLGA8IPA6NC78 632 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 GOLGA8JA6NMD2 632 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 DDHD2O94830 711 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 ATICP31939 592 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 CXCL12P48061 93 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 SLC45A4Q5BKX6 768 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 NT5DC3Q86UY8 548 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 RFFLQ8WZ73 363 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 FBXO32Q969P5 355 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 HES6Q96HZ4 224 aa8.97□□□□□ -0.97
VPS13B-206ENST00000496144 TNFAIP3P21580 790 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 HADHBP55084 474 aaKnown RBP8.96□□□□□ -0.97
VPS13B-206ENST00000496144 SLC7A5Q01650 507 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 POU5F1Q01860 360 aaKnown RBP8.96□□□□□ -0.97
VPS13B-206ENST00000496144 ARHGAP44Q17R89 818 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 SYCP2LQ5T4T6 812 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 DAB2IPQ5VWQ8 1189 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 SMG8Q8ND04 991 aaKnown RBP8.96□□□□□ -0.97
VPS13B-206ENST00000496144 TMC2Q8TDI7 906 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 HPDLQ96IR7 371 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 TMEM8AQ9HCN3 771 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 DDX43Q9NXZ2 648 aaKnown RBP8.96□□□□□ -0.97
VPS13B-206ENST00000496144 PSD3Q9NYI0 1048 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 FBXW11Q9UKB1 542 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 FARP1Q9Y4F1 1045 aaPredicted RBP8.96□□□□□ -0.97
VPS13B-206ENST00000496144 CAPN9O14815 690 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 GCLMP48507 274 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 ACOT2P49753 483 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 ZNF598Q86UK7 904 aaKnown RBP8.96□□□□□ -0.97
VPS13B-206ENST00000496144 BPIFB1Q8TDL5 484 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 ATP2A3Q93084 1043 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 ELOVL4Q9GZR5 314 aa8.96□□□□□ -0.97
VPS13B-206ENST00000496144 KCNK12Q9HB15 430 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms