RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 SMARCD1Q96GM5 515 aa17.16■□□□□ 0.34
HLA-A-208ENST00000496081 TRIM51Q9BSJ1 452 aa17.16■□□□□ 0.34
HLA-A-208ENST00000496081 RHOBTB2Q9BYZ6 727 aa17.16■□□□□ 0.34
HLA-A-208ENST00000496081 LRRC4Q9HBW1 653 aa17.16■□□□□ 0.34
HLA-A-208ENST00000496081 CHST7Q9NS84 486 aa17.16■□□□□ 0.34
HLA-A-208ENST00000496081 NFU1Q9UMS0 254 aa17.16■□□□□ 0.34
HLA-A-208ENST00000496081 R3HDM2Q9Y2K5 976 aaKnown RBP17.16■□□□□ 0.34
HLA-A-208ENST00000496081 hCG_1818297A0A087WSY0 165 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 NRP1O14786 923 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 KDELR1P24390 212 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 PTPN9P43378 593 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 KCNJ1P48048 391 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 MRPS5P82675 430 aaKnown RBP17.15■□□□□ 0.34
HLA-A-208ENST00000496081 EFHC1Q5JVL4 640 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 KAZNQ674X7 775 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 CMASQ8NFW8 434 aaPredicted RBP17.15■□□□□ 0.34
HLA-A-208ENST00000496081 FAM172AQ8WUF8 416 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 ATG4AQ8WYN0 398 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 RUNDC3BQ96NL0 473 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 C11orf84Q9BUA3 381 aaPredicted RBP17.15■□□□□ 0.34
HLA-A-208ENST00000496081 DCLK3Q9C098 648 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 CSNK1G1Q9HCP0 422 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 UTP11Q9Y3A2 253 aaKnown RBP17.15■□□□□ 0.34
HLA-A-208ENST00000496081 HHLA1C9JL84 531 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 MAP2K7O14733 419 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 HOXA2O43364 376 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 TADA2AO75478 443 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 TFE3P19532 575 aaPredicted RBP17.15■□□□□ 0.34
HLA-A-208ENST00000496081 TKTL1P51854 596 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 EPHB4P54760 987 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 RAB41Q5JT25 222 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 HDXQ7Z353 690 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 DDX42Q86XP3 938 aaKnown RBP eCLIP17.15■□□□□ 0.34
HLA-A-208ENST00000496081 CCDC105Q8IYK2 499 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 SIX6OS1Q8N1H7 587 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 ANKLE1Q8NAG6 615 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 CENPIQ92674 756 aaPredicted RBP17.15■□□□□ 0.34
HLA-A-208ENST00000496081 GDAP1L1Q96MZ0 367 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 ERP44Q9BS26 406 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 DDX23Q9BUQ8 820 aaKnown RBP17.15■□□□□ 0.34
HLA-A-208ENST00000496081 UBXN6Q9BZV1 441 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 NGRNQ9NPE2 291 aaKnown RBP17.15■□□□□ 0.34
HLA-A-208ENST00000496081 TMEM39AQ9NV64 488 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 HCSTQ9UBK5 93 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 MICAL3Q7RTP6 2002 aa17.15■□□□□ 0.34
HLA-A-208ENST00000496081 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 DAPK3O43293 454 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 TRAPPC3O43617 180 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 TJP3O95049 919 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 OAZ2O95190 189 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 HDAC4P56524 1084 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 TSPY1Q01534 308 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 SNX1Q13596 522 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 CUL1Q13616 776 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 CASP8Q14790 479 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 MAPRE1Q15691 268 aaKnown RBP17.14■□□□□ 0.33
HLA-A-208ENST00000496081 TAZQ16635 292 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 DUPD1Q68J44 220 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 GPRIN1Q7Z2K8 1008 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 EIF1ADQ8N9N8 165 aaKnown RBP17.14■□□□□ 0.33
HLA-A-208ENST00000496081 HSPH1Q92598 858 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 VWCEQ96DN2 955 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 PAWRQ96IZ0 340 aaKnown RBP17.14■□□□□ 0.33
HLA-A-208ENST00000496081 ADAM33Q9BZ11 813 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 RAB17Q9H0T7 212 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 HOMER3Q9NSC5 361 aa17.14■□□□□ 0.33
HLA-A-208ENST00000496081 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.14■□□□□ 0.33
HLA-A-208ENST00000496081 FNDC1Q4ZHG4 1894 aaPredicted RBP17.13■□□□□ 0.33
HLA-A-208ENST00000496081 PTPRDP23468 1912 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 PRPSAP2O60256 369 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 HSF2BPO75031 334 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 ALDH2P05091 517 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 CD48P09326 243 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 CLTBP09497 229 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 DESP17661 470 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 BDNFP23560 247 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 ECHS1P30084 290 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 MATKP42679 507 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 SLC11A1P49279 550 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 BCAR1P56945 870 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 YWHAZP63104 245 aaKnown RBP17.13■□□□□ 0.33
HLA-A-208ENST00000496081 CCNG2Q16589 344 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 SCYL2Q6P3W7 929 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 EMBQ6PCB8 327 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.13■□□□□ 0.332e-7■■■■□ 20
HLA-A-208ENST00000496081 DEFB106AQ8N104 65 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 KCTD6Q8NC69 237 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 SLCO2A1Q92959 643 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 TMEM106CQ9BVX2 250 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 ULBP1Q9BZM6 244 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 DPH5Q9H2P9 285 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 C11orf49Q9H6J7 331 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 RASAL2Q9UJF2 1139 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 ADAM28Q9UKQ2 775 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 EFR3BQ9Y2G0 817 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 VWA8A3KMH1 1905 aa17.13■□□□□ 0.33
HLA-A-208ENST00000496081 TBKBP1A7MCY6 615 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 ENDOD1O94919 500 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 FAM153BP0C7A2 387 aa17.12■□□□□ 0.33
HLA-A-208ENST00000496081 TNNT3P45378 269 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms