RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.01□□□□□ -0.17
GPC1-209ENST00000495100 SOWAHBA6NEL2 793 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 P4HA1P13674 534 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 MLH1P40692 756 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 POLE2P56282 527 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 GBE1Q04446 702 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 C1QBPQ07021 282 aaKnown RBP14.01□□□□□ -0.17
GPC1-209ENST00000495100 MGAT5Q09328 741 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 TRMT10BQ6PF06 316 aaKnown RBP14.01□□□□□ -0.17
GPC1-209ENST00000495100 B3GNT9Q6UX72 402 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 SDCCAG8Q86SQ7 713 aaPredicted RBP14.01□□□□□ -0.17
GPC1-209ENST00000495100 SPATA6LQ8N4H0 392 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 ALLCQ8N6M5 410 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 C1orf127Q8N9H9 656 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 PTPRN2Q92932 1015 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 MPHOSPH6Q99547 160 aaKnown RBP14.01□□□□□ -0.17
GPC1-209ENST00000495100 STRA6Q9BX79 667 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 TMEM120AQ9BXJ8 343 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 CXCL16Q9H2A7 254 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 IFT122Q9HBG6 1241 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 RXFP1Q9HBX9 757 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 TXNRD2Q9NNW7 524 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 MAN1C1Q9NR34 630 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 NENFQ9UMX5 172 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 IQANK1A0A1B0GTG1 560 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 CLDN5O00501 218 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 AVPR1AP37288 418 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 ZNF252P-AS1Q0IIN9 211 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 MPZL3Q6UWV2 235 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 ELOVL4Q9GZR5 314 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 GRID1Q9ULK0 1009 aa14.01□□□□□ -0.17
GPC1-209ENST00000495100 MUTP22033 750 aa14□□□□□ -0.17
GPC1-209ENST00000495100 CDKN2BP42772 138 aa14□□□□□ -0.17
GPC1-209ENST00000495100 AQP5P55064 265 aa14□□□□□ -0.17
GPC1-209ENST00000495100 ITKQ08881 620 aa14□□□□□ -0.17
GPC1-209ENST00000495100 DPYSL3Q14195 570 aa14□□□□□ -0.17
GPC1-209ENST00000495100 HEATR6Q6AI08 1181 aaKnown RBP14□□□□□ -0.17
GPC1-209ENST00000495100 FAM183BPQ6ZVS7 135 aa14□□□□□ -0.17
GPC1-209ENST00000495100 PIGWQ7Z7B1 504 aa14□□□□□ -0.17
GPC1-209ENST00000495100 SUGP1Q8IWZ8 645 aaKnown RBP14□□□□□ -0.17
GPC1-209ENST00000495100 PNPLA1Q8N8W4 532 aa14□□□□□ -0.17
GPC1-209ENST00000495100 PPP4R1Q8TF05 950 aa14□□□□□ -0.17
GPC1-209ENST00000495100 TMEM176AQ96HP8 235 aa14□□□□□ -0.17
GPC1-209ENST00000495100 ACO2Q99798 780 aaKnown RBP14□□□□□ -0.17
GPC1-209ENST00000495100 SNX25Q9H3E2 840 aa14□□□□□ -0.17
GPC1-209ENST00000495100 C17orf75Q9HAS0 396 aa14□□□□□ -0.17
GPC1-209ENST00000495100 DPP3Q9NY33 737 aa14□□□□□ -0.17
GPC1-209ENST00000495100 KLHL8Q9P2G9 620 aaPredicted RBP14□□□□□ -0.17
GPC1-209ENST00000495100 COQ4Q9Y3A0 265 aa14□□□□□ -0.17
GPC1-209ENST00000495100 TCRBV9S1A1TA0A576 114 aa14□□□□□ -0.17
GPC1-209ENST00000495100 GPD1P21695 349 aa14□□□□□ -0.17
GPC1-209ENST00000495100 ITIH4Q14624 930 aa14□□□□□ -0.17
GPC1-209ENST00000495100 TWF2Q6IBS0 349 aaKnown RBP14□□□□□ -0.17
GPC1-209ENST00000495100 PLEKHA7Q6IQ23 1121 aa14□□□□□ -0.17
GPC1-209ENST00000495100 WDTC1Q8N5D0 677 aa14□□□□□ -0.17
GPC1-209ENST00000495100 EDEM1Q92611 657 aa14□□□□□ -0.17
GPC1-209ENST00000495100 KLC2Q9H0B6 622 aa14□□□□□ -0.17
GPC1-209ENST00000495100 AVENQ9NQS1 362 aaPredicted RBP14□□□□□ -0.17
GPC1-209ENST00000495100 STRIP2Q9ULQ0 834 aa14□□□□□ -0.17
GPC1-209ENST00000495100 LAMB1P07942 1786 aa14□□□□□ -0.17
GPC1-209ENST00000495100 LAMB2P55268 1798 aa14□□□□□ -0.17
GPC1-209ENST00000495100 APOL1O14791 398 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 ONECUT3O60422 494 aaPredicted RBP13.99□□□□□ -0.17
GPC1-209ENST00000495100 KRT37O76014 449 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 PDE5AO76074 875 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 CYP1A1P04798 512 aaPredicted RBP13.99□□□□□ -0.17
GPC1-209ENST00000495100 PGM1P36871 562 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 MTFR1Q15390 333 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 GEN1Q17RS7 908 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 PPP1R26Q5T8A7 1209 aaPredicted RBP13.99□□□□□ -0.17
GPC1-209ENST00000495100 C6orf163Q5TEZ5 329 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 C1orf146Q5VVC0 180 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 KLRG1Q96E93 195 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 CELF6Q96J87 481 aaKnown RBP13.99□□□□□ -0.17
GPC1-209ENST00000495100 TIPINQ9BVW5 301 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 DCTN3O75935 186 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 OSBPP22059 807 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 EFNA5P52803 228 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 KPNB1Q14974 876 aaKnown RBP13.99□□□□□ -0.17
GPC1-209ENST00000495100 ZNF677Q86XU0 584 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 TNS4Q8IZW8 715 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 PPFIBP2Q8ND30 876 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 PCYT2Q99447 389 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 TXLNGYQ9BZA5 131 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 SDCBP2Q9H190 292 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 DHX33Q9H6R0 707 aaKnown RBP13.99□□□□□ -0.17
GPC1-209ENST00000495100 LRRC4Q9HBW1 653 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 KNL1Q8NG31 2342 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 MAFGO15525 162 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 KRT36O76013 467 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 GPX6P59796 221 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 ANKRD20A2Q5SQ80 823 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 ANKRD20A1Q5TYW2 823 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 IER5Q5VY09 327 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 MAP1SQ66K74 1059 aaPredicted RBP13.99□□□□□ -0.17
GPC1-209ENST00000495100 METTL7BQ6UX53 244 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 YTHDF3Q7Z739 585 aaKnown RBP13.99□□□□□ -0.17
GPC1-209ENST00000495100 RYBPQ8N488 228 aaPredicted RBP13.99□□□□□ -0.17
GPC1-209ENST00000495100 SMC1BQ8NDV3 1235 aa13.99□□□□□ -0.17
GPC1-209ENST00000495100 SERAC1Q96JX3 654 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms