RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 CTCFP49711 727 aaPredicted RBP11.72□□□□□ -0.53
LDHA-211ENST00000494573 CRYBB1P53674 252 aaPredicted RBP11.72□□□□□ -0.53
LDHA-211ENST00000494573 SLC18A1P54219 525 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 BCAT1P54687 386 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 ROR1Q01973 937 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 TMEM62Q0P6H9 643 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 KRT81Q14533 505 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 HIF1AQ16665 826 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 SV2CQ496J9 727 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 CCDC38Q502W7 563 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 EFHC2Q5JST6 749 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 PRAMEF19Q5SWL8 479 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 UBXN11Q5T124 520 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 PPP1R21Q6ZMI0 780 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 CCDC121Q6ZUS5 278 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 PIGWQ7Z7B1 504 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 CCDC13Q8IYE1 715 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 LRRC34Q8IZ02 419 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 ATP11CQ8NB49 1132 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 CCDC197Q8NCU1 140 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 OR6B3Q8NGW1 331 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 CPT1BQ92523 772 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 MAML1Q92585 1016 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 C18orf25Q96B23 403 aaPredicted RBP11.72□□□□□ -0.53
LDHA-211ENST00000494573 FAF2Q96CS3 445 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 PRMT1Q99873 361 aaKnown RBP11.72□□□□□ -0.53
LDHA-211ENST00000494573 CALN1Q9BXU9 219 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 CXCL16Q9H2A7 254 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 NXF3Q9H4D5 531 aaKnown RBP11.72□□□□□ -0.53
LDHA-211ENST00000494573 ACTR5Q9H9F9 607 aaPredicted RBP11.72□□□□□ -0.53
LDHA-211ENST00000494573 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.53
LDHA-211ENST00000494573 CTNNAL1Q9UBT7 734 aa11.72□□□□□ -0.53
LDHA-211ENST00000494573 SMIM28A0A1B0GU29 152 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 A8MXQ7 604 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 APOL1O14791 398 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 PAPSS1O43252 624 aaPredicted RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 IGHA2P01877 340 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 MYL3P08590 195 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 GHRP10912 638 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 GNAT1P11488 350 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 WARSP23381 471 aaKnown RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 GCAP28676 217 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 RGS2P41220 211 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 RGS7P49802 495 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 TAF6P49848 677 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 GDF10P55107 478 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 RNASELQ05823 741 aaKnown RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 PDE4CQ08493 712 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 PDIA2Q13087 525 aaKnown RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 HIC1Q14526 733 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 TMED2Q15363 201 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 TAF5Q15542 800 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 SOWAHAQ2M3V2 549 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 C15orf59Q2T9L4 293 aaPredicted RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 FBXO47Q5MNV8 452 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 SLC9A4Q6AI14 798 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 CYP4F22Q6NT55 531 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 C4orf22Q6V702 233 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 ARHGEF18Q6ZSZ5 1173 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 SLC26A9Q7LBE3 791 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 TRABD2AQ86V40 505 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 UNC45BQ8IWX7 931 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 CYP4X1Q8N118 509 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 C12orf29Q8N999 325 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 ANKRD52Q8NB46 1076 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 SPATA18Q8TC71 538 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 FAM172AQ8WUF8 416 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 KBTBD7Q8WVZ9 684 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 DYDC1Q8WWB3 177 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 DNAJB3Q8WWF6 145 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 CKAP2Q8WWK9 683 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 KHSRPQ92945 711 aaKnown RBP eCLIP11.71□□□□□ -0.53
LDHA-211ENST00000494573 RTP4Q96DX8 246 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 SGSM3Q96HU1 749 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 CABS1Q96KC9 395 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 HSFY1Q96LI6 401 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 ZNF670Q9BS34 389 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 FRMD8Q9BZ67 464 aaPredicted RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 SNX25Q9H3E2 840 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 PCDH18Q9HCL0 1135 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 FAM49BQ9NUQ9 324 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 FLRT1Q9NZU1 646 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 PIN4Q9Y237 131 aaKnown RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 GINS2Q9Y248 185 aa11.71□□□□□ -0.53
LDHA-211ENST00000494573 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.71□□□□□ -0.53
LDHA-211ENST00000494573 PATJQ8NI35 1801 aa11.71□□□□□ -0.54
LDHA-211ENST00000494573 CASP8AP2Q9UKL3 1982 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 GOLGA6L7A0A1B0GV03 622 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 BCLAF3A2AJT9 711 aaKnown RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 KPNA7A9QM74 516 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 CHADO15335 359 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 PRPF4O43172 522 aaKnown RBP eCLIP11.7□□□□□ -0.54
LDHA-211ENST00000494573 TREHO43280 583 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 KPNA6O60684 536 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 TOMM70O94826 608 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 ZFXP17010 805 aaPredicted RBP11.7□□□□□ -0.54
LDHA-211ENST00000494573 LRPAP1P30533 357 aa11.7□□□□□ -0.54
LDHA-211ENST00000494573 GNL1P36915 607 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms