RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CCNT2O60583 730 aaKnown RBP2.82□□□□□ -1.96
LMNB1-207ENST00000494185 SRGAP2O75044 1071 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 TCEA3O75764 348 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 PIAS2O75928 621 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 CDK4P11802 303 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 MYCLP12524 364 aaPredicted RBP2.82□□□□□ -1.96
LMNB1-207ENST00000494185 IL1R1P14778 569 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 TSHRP16473 764 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 KCNA3P22001 575 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 TNFSF4P23510 183 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 CERS1P27544 350 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 IL1R2P27930 398 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 CPT1AP50416 773 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 PLCD1P51178 756 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 ALDH5A1P51649 535 aaPredicted RBP2.82□□□□□ -1.96
LMNB1-207ENST00000494185 HNRNPMP52272 730 aaKnown RBP eCLIP2.82□□□□□ -1.96
LMNB1-207ENST00000494185 BCAT1P54687 386 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 ZIK1Q3SY52 487 aaPredicted RBP2.82□□□□□ -1.96
LMNB1-207ENST00000494185 DEPDC1Q5TB30 811 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 DPY19L2P1Q6NXN4 242 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 ZDHHC24Q6UX98 284 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 RINLQ6ZS11 566 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 ARHGEF25Q86VW2 580 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 PRIMA1Q86XR5 153 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 C16orf71Q8IYS4 520 aaPredicted RBP2.82□□□□□ -1.96
LMNB1-207ENST00000494185 IZUMO1Q8IYV9 350 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 ATP11CQ8NB49 1132 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 HASPINQ8TF76 798 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 SOCS4Q8WXH5 440 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 CCDC138Q96M89 665 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 AGAP2Q99490 1192 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 COLEC11Q9BWP8 271 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 MAGEB5Q9BZ81 275 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 CHST8Q9H2A9 424 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 CXorf36Q9H7Y0 433 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 NLRC4Q9NPP4 1024 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 NRIP3Q9NQ35 241 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 PLCB1Q9NQ66 1216 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 TBC1D23Q9NUY8 699 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 TMOD4Q9NZQ9 345 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 NKX1-2Q9UD57 310 aaPredicted RBP2.82□□□□□ -1.96
LMNB1-207ENST00000494185 TBC1D30Q9Y2I9 924 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 MRPS17Q9Y2R5 130 aaKnown RBP2.82□□□□□ -1.96
LMNB1-207ENST00000494185 DAAM1Q9Y4D1 1078 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 CDY1Q9Y6F8 540 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 COX11Q9Y6N1 276 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 ADGRA2Q96PE1 1338 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 COL4A3Q01955 1670 aa2.82□□□□□ -1.96
LMNB1-207ENST00000494185 A1L4Q6 167 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 LINC00473A8K010 186 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 ADM5C9JUS6 153 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 APOL1O14791 398 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 PPM1DO15297 605 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 FESP07332 822 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 CSF1RP07333 972 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 RHOP08100 348 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 SLC3A2P08195 630 aaKnown RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 IL6RP08887 468 aaPredicted RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 CHRM5P08912 532 aaPredicted RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 ELFN1P0C7U0 828 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 MYL4P12829 197 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 KRT4P19013 534 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 FGFR2P21802 821 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 DRD4P21917 467 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 SERPINB3P29508 390 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 CYP2C18P33260 490 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 KCNJ4P48050 445 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 PTDSS1P48651 473 aaKnown RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 DGKQP52824 942 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 ATXN1P54253 815 aaKnown RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 NANOS3P60323 173 aaKnown RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 MRPS21P82921 87 aaKnown RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 HTRA4P83105 476 aaPredicted RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 TXNL4AP83876 142 aaKnown RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 FOXI1Q12951 378 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 PCID2Q5JVF3 399 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 TREML2Q5T2D2 321 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 KLHDC7AQ5VTJ3 777 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 FBXO42Q6P3S6 717 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 VSTM1Q6UX27 236 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 SERPINA13PQ6UXR4 307 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 Q6ZPA2 131 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 SRLQ86TD4 932 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 SFTPA1Q8IWL2 248 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 FAM186BQ8IYM0 893 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 OR2C3Q8N628 320 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 RNF152Q8N8N0 203 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 BRI3BPQ8WY22 251 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 ATG4AQ8WYN0 398 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 PPP2R3CQ969Q6 453 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 RIPOR3Q96MK2 946 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 HS6ST2Q96MM7 605 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 NAP1L4Q99733 375 aaKnown RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 HERPUD2Q9BSE4 406 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 CINPQ9BW66 212 aaPredicted RBP2.81□□□□□ -1.96
LMNB1-207ENST00000494185 VN1R3Q9BXE9 311 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 PTPRHQ9HD43 1115 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 SEMA4GQ9NTN9 838 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 SERTAD4Q9NUC0 356 aa2.81□□□□□ -1.96
LMNB1-207ENST00000494185 DNMT3BQ9UBC3 853 aaKnown RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms