RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ZNF263O14978 683 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 CLIC2O15247 247 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 EIF3HO15372 352 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDAC6-234ENST00000493923 LAMTOR5O43504 91 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 RTN2O75298 545 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 CCDC175P0C221 793 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 CHRNB1P11230 501 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 HOXB3P14651 431 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-234ENST00000493923 LMO2P25791 158 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 GCKP35557 465 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 CCT5P48643 541 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 FNTAP49354 379 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 LMNB2Q03252 620 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 EHHADHQ08426 723 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 FCHO2Q0JRZ9 810 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 POSTNQ15063 836 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 SOWAHAQ2M3V2 549 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 TXNDC8Q6A555 127 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 CCDC70Q6NSX1 233 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 PKN3Q6P5Z2 889 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 ZNF852Q6ZMS4 543 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 LIMS2Q7Z4I7 341 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 KIAA2013Q8IYS2 634 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 SYCP3Q8IZU3 236 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 CSGALNACT2Q8N6G5 542 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 CCHCR1Q8TD31 782 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 KBTBD7Q8WVZ9 684 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 FAM3CQ92520 227 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 ZNF516Q92618 1163 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 SLC22A12Q96S37 553 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 OSBPL9Q96SU4 736 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 CHRDQ9H2X0 955 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 ANKZF1Q9H8Y5 726 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 LMAN1LQ9HAT1 526 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 HPS4Q9NQG7 708 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 PRMT8Q9NR22 394 aaPredicted RBP8.67□□□□□ -1.02
HDAC6-234ENST00000493923 KLC4Q9NSK0 619 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 TMEM30AQ9NV96 361 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 IFNKQ9P0W0 207 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 RCOR1Q9UKL0 485 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 GTF3C4Q9UKN8 822 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 PCDHA7Q9UN72 937 aa8.67□□□□□ -1.02
HDAC6-234ENST00000493923 SPAG17Q6Q759 2223 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 EML5Q05BV3 1969 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 MYO16Q9Y6X6 1858 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 A0A1W2PQ27 194 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 A0A1W2PQ64 194 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 A0A1W2PQD8 194 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 CHADO15335 359 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 LILRB5O75023 590 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 PPP6R2O75170 966 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 CST3P01034 146 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 ARSAP15289 507 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 PECAM1P16284 738 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 RPS9P46781 194 aaKnown RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 NLRP12P59046 1061 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 PSMC1P62191 440 aaKnown RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 ASIC1P78348 528 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 SKOR1P84550 965 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 POU5F1Q01860 360 aaKnown RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 APBA1Q02410 837 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 CKAP4Q07065 602 aaKnown RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 SRSF5Q13243 272 aaKnown RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 CUL4BQ13620 913 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 SV2CQ496J9 727 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 INTS6LQ5JSJ4 861 aaKnown RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 FBXW10Q5XX13 1052 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 TRIM68Q6AZZ1 485 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 METTL23Q86XA0 190 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 NELFCDQ8IXH7 590 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 GPD1LQ8N335 351 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 RDH13Q8NBN7 331 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 LEMD2Q8NC56 503 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 ZBTB44Q8NCP5 570 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 ZNF483Q8TF39 744 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 DEPDC1BQ8WUY9 529 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 SCFD1Q8WVM8 642 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 IRF7Q92985 503 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 USP13Q92995 863 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 RMDN1Q96DB5 314 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 DTNBP1Q96EV8 351 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 ANKRD27Q96NW4 1050 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 CYP2S1Q96SQ9 504 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 C7orf25Q9BPX7 421 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 MRPL45Q9BRJ2 306 aaKnown RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 CAPS2Q9BXY5 557 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 OXCT2Q9BYC2 517 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 TASP1Q9H6P5 420 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 FBRSL1Q9HCM7 1045 aaKnown RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 ABCB6Q9NP58 842 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 CRTAC1Q9NQ79 661 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 TRPV5Q9NQA5 729 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 INTS13Q9NVM9 706 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 GDAP2Q9NXN4 497 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 DDX43Q9NXZ2 648 aaKnown RBP8.66□□□□□ -1.02
HDAC6-234ENST00000493923 HSPBP1Q9NZL4 362 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 FBXO4Q9UKT5 387 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 EXOC7Q9UPT5 735 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 ASB3Q9Y575 518 aa8.66□□□□□ -1.02
HDAC6-234ENST00000493923 SNX9Q9Y5X1 595 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms