RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 PTCHD3Q3KNS1 767 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 LEXMQ3ZCV2 418 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 TMTC4Q5T4D3 741 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 KRTAP5-11Q6L8G4 156 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 ZNF549Q6P9A3 640 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 DCDC5Q6ZRR9 648 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 RAB11FIP4Q86YS3 637 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 MAFAQ8NHW3 353 aaPredicted RBP5.2□□□□□ -1.58
SMC4-223ENST00000493695 GPATCH3Q96I76 525 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 MESP1Q9BRJ9 268 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 PIH1D1Q9NWS0 290 aaKnown RBP5.2□□□□□ -1.58
SMC4-223ENST00000493695 DRG1Q9Y295 367 aaKnown RBP5.2□□□□□ -1.58
SMC4-223ENST00000493695 STXBP5LQ9Y2K9 1186 aa5.2□□□□□ -1.58
SMC4-223ENST00000493695 RGS10O43665 173 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 TULP3O75386 442 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 CREB1P16220 341 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 WNT3P56703 355 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 NANOS2P60321 138 aaKnown RBP5.19□□□□□ -1.58
SMC4-223ENST00000493695 RPS13P62277 151 aaKnown RBP5.19□□□□□ -1.58
SMC4-223ENST00000493695 ERV3-1Q14264 604 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 KCNB1Q14721 858 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 CERCAMQ5T4B2 595 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 VSTM1Q6UX27 236 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 ZNF783Q6ZMS7 281 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 C9orf47Q6ZRZ4 202 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 PTCHD4Q6ZW05 846 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 ARFGAP1Q8N6T3 406 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 CGRRF1Q99675 332 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 MGAT4CQ9UBM8 478 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 MED16Q9Y2X0 877 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 SPEF1Q9Y4P9 236 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 WASHC2CQ9Y4E1 1318 aa5.19□□□□□ -1.58
SMC4-223ENST00000493695 TLR2O60603 784 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 RASAL1O95294 804 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 ALDH2P05091 517 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 CPA2P48052 419 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 CCNIQ14094 377 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 FGL2Q14314 439 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 LARS2Q15031 903 aaKnown RBP5.18□□□□□ -1.58
SMC4-223ENST00000493695 SLC9C1Q4G0N8 1177 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 LIX1LQ8IVB5 337 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 DNAJB14Q8TBM8 379 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 PNISRQ8TF01 805 aaKnown RBP5.18□□□□□ -1.58
SMC4-223ENST00000493695 RSPRY1Q96DX4 576 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 MAFFQ9ULX9 164 aa5.18□□□□□ -1.58
SMC4-223ENST00000493695 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.17□□□□□ -1.58
SMC4-223ENST00000493695 NCLP19338 710 aaKnown RBP5.17□□□□□ -1.58
SMC4-223ENST00000493695 DIO1P49895 249 aa5.17□□□□□ -1.58
SMC4-223ENST00000493695 CTBP1Q13363 440 aa5.17□□□□□ -1.58
SMC4-223ENST00000493695 STIM1Q13586 685 aa5.17□□□□□ -1.58
SMC4-223ENST00000493695 SEC23BQ15437 767 aa5.17□□□□□ -1.58
SMC4-223ENST00000493695 PTPROQ16827 1216 aa5.17□□□□□ -1.58
SMC4-223ENST00000493695 CACHD1Q5VU97 1274 aa5.17□□□□□ -1.58
SMC4-223ENST00000493695 ZBTB46Q86UZ6 589 aa5.17□□□□□ -1.58
SMC4-223ENST00000493695 TRMOQ9BU70 441 aa5.17□□□□□ -1.58
SMC4-223ENST00000493695 PCDH12Q9NPG4 1184 aa5.17□□□□□ -1.58
SMC4-223ENST00000493695 BTN3A1O00481 513 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 TBC1D4O60343 1298 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 SRGAP2O75044 1071 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 CT47B1P0C2W7 299 aaPredicted RBP5.16□□□□□ -1.58
SMC4-223ENST00000493695 TGFB3P10600 412 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 APEHP13798 732 aaKnown RBP5.16□□□□□ -1.58
SMC4-223ENST00000493695 CDC25AP30304 524 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 YPEL5P62699 121 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 ZNF793Q6ZN11 406 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 GAS2L3Q86XJ1 694 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 NGDNQ8NEJ9 315 aaKnown RBP5.16□□□□□ -1.58
SMC4-223ENST00000493695 OR6B3Q8NGW1 331 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 PLBD2Q8NHP8 589 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.16□□□□□ -1.58
SMC4-223ENST00000493695 ZCRB1Q8TBF4 217 aaKnown RBP5.16□□□□□ -1.58
SMC4-223ENST00000493695 ZNF398Q8TD17 642 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 ASPSCR1Q9BZE9 553 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 COL4A3BPQ9Y5P4 624 aa5.16□□□□□ -1.58
SMC4-223ENST00000493695 A0A1W2PPL8 197 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 LACTBL1A8MY62 500 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 TMEM233B4DJY2 109 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 SYF2O95926 243 aaKnown RBP5.15□□□□□ -1.59
SMC4-223ENST00000493695 CTSAP10619 480 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 RGS19P49795 217 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 ITGA8P53708 1063 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 RAB1AP62820 205 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 SLC13A2Q13183 592 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 MFSD13AQ14CX5 517 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 ZNF750Q32MQ0 723 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 ZNF585BQ52M93 769 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 SCNM1Q9BWG6 230 aa5.15□□□□□ -1.59
SMC4-223ENST00000493695 NOP58Q9Y2X3 529 aaKnown RBP5.15□□□□□ -1.59
SMC4-223ENST00000493695 A0A087WWL8 130 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 CLIC1O00299 241 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 SMAD6O43541 496 aaKnown RBP5.14□□□□□ -1.59
SMC4-223ENST00000493695 AP1G1O43747 822 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 TMPRSS11DO60235 418 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 OFD1O75665 1012 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 KITP10721 976 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 AKAP5P24588 427 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 EPHA3P29320 983 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 TACR3P29371 465 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 BCAT1P54687 386 aa5.14□□□□□ -1.59
SMC4-223ENST00000493695 RHDQ02161 417 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms